1j0r: Difference between revisions

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[[Image:1j0r.jpg|left|200px]]<br /><applet load="1j0r" size="~~450~~" color="white" frame="true" align="right" spinBox="true"

[[Image:1j0r.jpg|left|200px]]<br /><applet load="1j0r" size="350" color="white" frame="true" align="right" spinBox="true"

caption="1j0r, resolution 2.5Å" />

'''Crystal structure of the replication termination protein mutant C110S'''<br />

==Overview==

We report the structural and biophysical consequences of cysteine, substitutions in the DNA-binding replication terminator protein (RTP) of, Bacillus subtilis, that resulted in an optimised RTP mutant suitable for, structural studies. The cysteine residue 110 was replaced with alanine, valine or serine. Protein secondary structure and stability (using, circular dichroism spectropolarimetry), self-association (using analytical, ultracentrifugation), and DNA-binding measurements revealed RTP.C110S to, be the most similar mutant to wild-type RTP. The C110A and C110V.RTP, mutants were less soluble, less stable and showed lower DNA-binding, affinity. The structure of RTP.C110S, solved to 2.5A resolution using, crystallographic methods, showed no major structural perturbation due to, the mutation. Heteronuclear NMR spectroscopic studies revealed subtle, differences in the electronic environment about the site of mutation. The, study demonstrates the suitability of serine as a substitute for cysteine, in RTP and the high sensitivity of protein behaviour to single amino acid, substitutions.

We report the structural and biophysical consequences of cysteine substitutions in the DNA-binding replication terminator protein (RTP) of Bacillus subtilis, that resulted in an optimised RTP mutant suitable for structural studies. The cysteine residue 110 was replaced with alanine, valine or serine. Protein secondary structure and stability (using circular dichroism spectropolarimetry), self-association (using analytical ultracentrifugation), and DNA-binding measurements revealed RTP.C110S to be the most similar mutant to wild-type RTP. The C110A and C110V.RTP mutants were less soluble, less stable and showed lower DNA-binding affinity. The structure of RTP.C110S, solved to 2.5A resolution using crystallographic methods, showed no major structural perturbation due to the mutation. Heteronuclear NMR spectroscopic studies revealed subtle differences in the electronic environment about the site of mutation. The study demonstrates the suitability of serine as a substitute for cysteine in RTP and the high sensitivity of protein behaviour to single amino acid substitutions.

==About this Structure==

1J0R is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://~~ispc~~.weizmann.ac.il/oca-bin/ocashort?id=1J0R OCA].

1J0R is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J0R OCA].

==Reference==

Line 13:

[[Category: Bacillus subtilis]]

[[Category: Single protein]]

[[Category: Duggin, I.G.]]

[[Category: Duggin, I G.]]

[[Category: Hastings, A.F.]]

[[Category: Hastings, A F.]]

[[Category: Vivian, J.P.]]

[[Category: Vivian, J P.]]

[[Category: Wake, R.G.]]

[[Category: Wake, R G.]]

[[Category: Wilce, J.A.]]

[[Category: Wilce, J A.]]

[[Category: Wilce, M.C.J.]]

[[Category: Wilce, M C.J.]]

[[Category: dna-binding protein]]

[[Category: winged-helix]]

''Page seeded by [http://~~ispc~~.weizmann.ac.il/oca OCA ] on ~~Tue Nov 20~~ 17:~~50:28 2007~~''

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 13:17:44 2008''

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@@ Line 1: / Line 1: @@
-[[Image:1j0r.jpg|left|200px]]<br /><applet load="1j0r" size="450" color="white" frame="true" align="right" spinBox="true"
+[[Image:1j0r.jpg|left|200px]]<br /><applet load="1j0r" size="350" color="white" frame="true" align="right" spinBox="true"
 caption="1j0r, resolution 2.5&Aring;" />
 '''Crystal structure of the replication termination protein mutant C110S'''<br />
 ==Overview==
-We report the structural and biophysical consequences of cysteine, substitutions in the DNA-binding replication terminator protein (RTP) of, Bacillus subtilis, that resulted in an optimised RTP mutant suitable for, structural studies. The cysteine residue 110 was replaced with alanine, valine or serine. Protein secondary structure and stability (using, circular dichroism spectropolarimetry), self-association (using analytical, ultracentrifugation), and DNA-binding measurements revealed RTP.C110S to, be the most similar mutant to wild-type RTP. The C110A and C110V.RTP, mutants were less soluble, less stable and showed lower DNA-binding, affinity. The structure of RTP.C110S, solved to 2.5A resolution using, crystallographic methods, showed no major structural perturbation due to, the mutation. Heteronuclear NMR spectroscopic studies revealed subtle, differences in the electronic environment about the site of mutation. The, study demonstrates the suitability of serine as a substitute for cysteine, in RTP and the high sensitivity of protein behaviour to single amino acid, substitutions.
+We report the structural and biophysical consequences of cysteine substitutions in the DNA-binding replication terminator protein (RTP) of Bacillus subtilis, that resulted in an optimised RTP mutant suitable for structural studies. The cysteine residue 110 was replaced with alanine, valine or serine. Protein secondary structure and stability (using circular dichroism spectropolarimetry), self-association (using analytical ultracentrifugation), and DNA-binding measurements revealed RTP.C110S to be the most similar mutant to wild-type RTP. The C110A and C110V.RTP mutants were less soluble, less stable and showed lower DNA-binding affinity. The structure of RTP.C110S, solved to 2.5A resolution using crystallographic methods, showed no major structural perturbation due to the mutation. Heteronuclear NMR spectroscopic studies revealed subtle differences in the electronic environment about the site of mutation. The study demonstrates the suitability of serine as a substitute for cysteine in RTP and the high sensitivity of protein behaviour to single amino acid substitutions.
 ==About this Structure==
-J0R is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1J0R OCA].
+J0R is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J0R OCA].
 ==Reference==
@@ Line 13: / Line 13: @@
 [[Category: Bacillus subtilis]]
 [[Category: Single protein]]
-[[Category: Duggin, I.G.]]
+[[Category: Duggin, I G.]]
-[[Category: Hastings, A.F.]]
+[[Category: Hastings, A F.]]
-[[Category: Vivian, J.P.]]
+[[Category: Vivian, J P.]]
-[[Category: Wake, R.G.]]
+[[Category: Wake, R G.]]
-[[Category: Wilce, J.A.]]
+[[Category: Wilce, J A.]]
-[[Category: Wilce, M.C.J.]]
+[[Category: Wilce, M C.J.]]
 [[Category: dna-binding protein]]
 [[Category: winged-helix]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 17:50:28 2007''
+''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 13:17:44 2008''