1nyl: Difference between revisions

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New page: left|200px<br /><applet load="1nyl" size="450" color="white" frame="true" align="right" spinBox="true" caption="1nyl, resolution 2.60Å" /> '''Unliganded glutaminy...
 
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[[Image:1nyl.jpg|left|200px]]<br /><applet load="1nyl" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:1nyl.jpg|left|200px]]<br /><applet load="1nyl" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="1nyl, resolution 2.60&Aring;" />
caption="1nyl, resolution 2.60&Aring;" />
'''Unliganded glutaminyl-tRNA synthetase'''<br />
'''Unliganded glutaminyl-tRNA synthetase'''<br />


==Overview==
==Overview==
The crystal structure of ligand-free E. coli glutaminyl-tRNA synthetase, (GlnRS) at 2.4 A resolution shows that substrate binding is essential to, construction of a catalytically proficient active site. tRNA binding, generates structural changes throughout the enzyme, repositioning key, active site peptides that bind glutamine and ATP. The structure gives, insight into longstanding questions regarding the tRNA dependence of, glutaminyl adenylate formation, the coupling of amino acid and tRNA, selectivities, and the roles of specific pathways for transmission of tRNA, binding signals to the active site. Comparative analysis of the unliganded, and tRNA-bound structures shows, in detail, how flexibility is built into, the enzyme architecture and suggests that the induced-fit transitions are, a key underlying determinant of both amino acid and tRNA specificity.
The crystal structure of ligand-free E. coli glutaminyl-tRNA synthetase (GlnRS) at 2.4 A resolution shows that substrate binding is essential to construction of a catalytically proficient active site. tRNA binding generates structural changes throughout the enzyme, repositioning key active site peptides that bind glutamine and ATP. The structure gives insight into longstanding questions regarding the tRNA dependence of glutaminyl adenylate formation, the coupling of amino acid and tRNA selectivities, and the roles of specific pathways for transmission of tRNA binding signals to the active site. Comparative analysis of the unliganded and tRNA-bound structures shows, in detail, how flexibility is built into the enzyme architecture and suggests that the induced-fit transitions are a key underlying determinant of both amino acid and tRNA specificity.


==About this Structure==
==About this Structure==
1NYL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Active as [http://en.wikipedia.org/wiki/Glutamine--tRNA_ligase Glutamine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.18 6.1.1.18] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1NYL OCA].  
1NYL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Active as [http://en.wikipedia.org/wiki/Glutamine--tRNA_ligase Glutamine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.18 6.1.1.18] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NYL OCA].  


==Reference==
==Reference==
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[[Category: Glutamine--tRNA ligase]]
[[Category: Glutamine--tRNA ligase]]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Perona, J.P.]]
[[Category: Perona, J P.]]
[[Category: Sherlin, L.D.]]
[[Category: Sherlin, L D.]]
[[Category: ligase]]
[[Category: ligase]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 22:39:49 2007''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 14:11:30 2008''