Secondary structure: Difference between revisions

Line 20:

Alternatively, use [[Scene authoring tools|Proteopedia's Scene Authoring Tools]] to display a structure as ''cartoon'' by selecting ''cartoon'' on the representation tab and then the ''color by structure'' button under the color tab.

If you want a convenient view of the structurally-determined [Secondary structure|secondary structure] , as well as the ''secondary structure topology'' or ''wiring diagram'', click on ''PDBsum'' below any structure on a PDB code page and navigate to the chain you are interested in from the '''Contents''' listing on left side of the main PDBsum page. The '''secondary structure''' will be illustrated above the sequence in the main view with the '''secondary structure topology'' or '''wiring diagram''' accessible on the right. The '''secondary structure''' will also be illustrated above the sequence in the main view accessible under the ''Sequence'' tab at the [http://www.pdb.org Protein Data Bank].

If you want a convenient view of the structurally-determined [[Secondary structure|secondary structure]] , as well as the ''secondary structure topology'' or ''wiring diagram'', click on ''PDBsum'' below any structure on a PDB code page and navigate to the chain you are interested in from the '''Contents''' listing on left side of the main PDBsum page. The '''secondary structure''' will be illustrated above the sequence in the main view with the '''secondary structure topology'' or '''wiring diagram''' accessible on the right. The '''secondary structure''' will also be illustrated above the sequence in the main view accessible under the ''Sequence'' tab at the [http://www.pdb.org Protein Data Bank].

==How Jmol Determines Secondary Structure==

Secondary structure: Difference between revisions

Navigation menu

Page actions

Page actions

Personal tools

Navigation

Search

Tools

@@ Line 20: / Line 20: @@
 Alternatively, use [[Scene authoring tools|Proteopedia's Scene Authoring Tools]] to display a structure as ''cartoon'' by selecting ''cartoon'' on the representation tab and then the ''color by structure'' button under the color tab.
-If you want a convenient view of the structurally-determined [Secondary structure|secondary structure] , as well as the ''secondary structure topology'' or ''wiring diagram'', click on ''PDBsum'' below any structure on a PDB code page and navigate to the chain you are interested in from the '''Contents''' listing on left side of the main PDBsum page. The '''secondary structure'''  will be illustrated above the sequence in the main view with the '''secondary structure topology'' or '''wiring diagram''' accessible on the right.  The '''secondary structure'''  will also be illustrated above the sequence in the main view accessible under the ''Sequence'' tab at the [http://www.pdb.org Protein Data Bank].
+If you want a convenient view of the structurally-determined [[Secondary structure|secondary structure]] , as well as the ''secondary structure topology'' or ''wiring diagram'', click on ''PDBsum'' below any structure on a PDB code page and navigate to the chain you are interested in from the '''Contents''' listing on left side of the main PDBsum page. The '''secondary structure'''  will be illustrated above the sequence in the main view with the '''secondary structure topology'' or '''wiring diagram''' accessible on the right.  The '''secondary structure'''  will also be illustrated above the sequence in the main view accessible under the ''Sequence'' tab at the [http://www.pdb.org Protein Data Bank].
 ==How Jmol Determines Secondary Structure==