1t4d: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
New page: left|200px<br /><applet load="1t4d" size="450" color="white" frame="true" align="right" spinBox="true" caption="1t4d, resolution 1.95Å" /> '''Crystal structure of...
 
OCA (talk | contribs)
No edit summary
Line 1: Line 1:
[[Image:1t4d.jpg|left|200px]]<br /><applet load="1t4d" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:1t4d.jpg|left|200px]]<br /><applet load="1t4d" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="1t4d, resolution 1.95&Aring;" />
caption="1t4d, resolution 1.95&Aring;" />
'''Crystal structure of Escherichia coli aspartate beta-semialdehyde dehydrogenase (EcASADH), at 1.95 Angstrom resolution'''<br />
'''Crystal structure of Escherichia coli aspartate beta-semialdehyde dehydrogenase (EcASADH), at 1.95 Angstrom resolution'''<br />


==Overview==
==Overview==
Two high-resolution structures have been determined for Eschericia coli, aspartate beta-semialdehyde dehydrogenase (ecASADH), an enzyme of the, aspartate biosynthetic pathway, which is a potential target for novel, antimicrobial drugs. Both ASADH structures were of the open form and were, refined to 1.95 A and 1.6 A resolution, allowing a more detailed, comparison with the closed form of the enzyme than previously possible. A, more complex scheme for domain closure is apparent with the subunit being, split into two further sub-domains with relative motions about three hinge, axes. Analysis of hinge data and torsion-angle difference plots is, combined to allow the proposal of a detailed structural mechanism for, ecASADH domain closure. Additionally, asymmetric distortions of individual, subunits are identified, which form the basis for the previously reported, "half-of-the-sites reactivity" (HOSR). A putative explanation of this, arrangement is also presented, suggesting the HOSR system may provide a, means for ecASADH to offset the energy required to remobilise flexible, loops at the end of the reaction cycle, and hence avoid falling into an, energy minimum.
Two high-resolution structures have been determined for Eschericia coli aspartate beta-semialdehyde dehydrogenase (ecASADH), an enzyme of the aspartate biosynthetic pathway, which is a potential target for novel antimicrobial drugs. Both ASADH structures were of the open form and were refined to 1.95 A and 1.6 A resolution, allowing a more detailed comparison with the closed form of the enzyme than previously possible. A more complex scheme for domain closure is apparent with the subunit being split into two further sub-domains with relative motions about three hinge axes. Analysis of hinge data and torsion-angle difference plots is combined to allow the proposal of a detailed structural mechanism for ecASADH domain closure. Additionally, asymmetric distortions of individual subunits are identified, which form the basis for the previously reported "half-of-the-sites reactivity" (HOSR). A putative explanation of this arrangement is also presented, suggesting the HOSR system may provide a means for ecASADH to offset the energy required to remobilise flexible loops at the end of the reaction cycle, and hence avoid falling into an energy minimum.


==About this Structure==
==About this Structure==
1T4D is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Active as [http://en.wikipedia.org/wiki/Aspartate-semialdehyde_dehydrogenase Aspartate-semialdehyde dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.11 1.2.1.11] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1T4D OCA].  
1T4D is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Active as [http://en.wikipedia.org/wiki/Aspartate-semialdehyde_dehydrogenase Aspartate-semialdehyde dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.11 1.2.1.11] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T4D OCA].  


==Reference==
==Reference==
Line 15: Line 15:
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Dhaliwal, B.]]
[[Category: Dhaliwal, B.]]
[[Category: Hawkins, A.R.]]
[[Category: Hawkins, A R.]]
[[Category: Lockyer, M.]]
[[Category: Lockyer, M.]]
[[Category: Nichols, C.E.]]
[[Category: Nichols, C E.]]
[[Category: Stammers, D.K.]]
[[Category: Stammers, D K.]]
[[Category: asadh]]
[[Category: asadh]]
[[Category: aspartate semialdehyde dehydrogenase]]
[[Category: aspartate semialdehyde dehydrogenase]]
Line 26: Line 26:
[[Category: nadp+ oxidoreductase (phosphorylating)]]
[[Category: nadp+ oxidoreductase (phosphorylating)]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 02:58:56 2007''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:09:49 2008''