1xtz: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
New page: left|200px<br /><applet load="1xtz" size="450" color="white" frame="true" align="right" spinBox="true" caption="1xtz, resolution 2.10Å" /> '''Crystal structure of...
 
OCA (talk | contribs)
No edit summary
Line 1: Line 1:
[[Image:1xtz.gif|left|200px]]<br /><applet load="1xtz" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:1xtz.gif|left|200px]]<br /><applet load="1xtz" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="1xtz, resolution 2.10&Aring;" />
caption="1xtz, resolution 2.10&Aring;" />
'''Crystal structure of the S. cerevisiae D-ribose-5-phosphate isomerase: comparison with the archeal and bacterial enzymes'''<br />
'''Crystal structure of the S. cerevisiae D-ribose-5-phosphate isomerase: comparison with the archeal and bacterial enzymes'''<br />


==Overview==
==Overview==
Ribose-5-phosphate isomerase A has an important role in sugar metabolism, by interconverting ribose-5-phosphate and ribulose-5-phosphate. This, enzyme is ubiquitous and highly conserved among the three kingdoms of, life. We have solved the 2.1 A resolution crystal structure of the, Saccharomyces cerevisiae enzyme by molecular replacement. This protein, adopts the same fold as its archaeal and bacterial orthologs with two, alpha/beta domains tightly packed together. Mapping of conserved residues, at the surface of the protein reveals strong invariability of the active, site pocket, suggesting a common ligand binding mode and a similar, catalytic mechanism. The yeast enzyme associates as a homotetramer, similarly to the archaeal protein. The effect of an inactivating mutation, (Arg189 to Lys) is discussed in view of the information brought by this, structure.
Ribose-5-phosphate isomerase A has an important role in sugar metabolism by interconverting ribose-5-phosphate and ribulose-5-phosphate. This enzyme is ubiquitous and highly conserved among the three kingdoms of life. We have solved the 2.1 A resolution crystal structure of the Saccharomyces cerevisiae enzyme by molecular replacement. This protein adopts the same fold as its archaeal and bacterial orthologs with two alpha/beta domains tightly packed together. Mapping of conserved residues at the surface of the protein reveals strong invariability of the active site pocket, suggesting a common ligand binding mode and a similar catalytic mechanism. The yeast enzyme associates as a homotetramer similarly to the archaeal protein. The effect of an inactivating mutation (Arg189 to Lys) is discussed in view of the information brought by this structure.


==About this Structure==
==About this Structure==
1XTZ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Active as [http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1XTZ OCA].  
1XTZ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Active as [http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XTZ OCA].  


==Reference==
==Reference==
Line 20: Line 20:
[[Category: Quevillon-Cheruel, S.]]
[[Category: Quevillon-Cheruel, S.]]
[[Category: Sorel, I.]]
[[Category: Sorel, I.]]
[[Category: Tilbeurgh, H.van.]]
[[Category: Tilbeurgh, H van.]]
[[Category: crystal structure]]
[[Category: crystal structure]]
[[Category: d-ribose-5-phosphate isomerase]]
[[Category: d-ribose-5-phosphate isomerase]]
[[Category: yeast]]
[[Category: yeast]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 06:20:36 2007''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:58:36 2008''