3mef: Difference between revisions
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{{STRUCTURE_3mef| PDB=3mef | SCENE= }} | {{STRUCTURE_3mef| PDB=3mef | SCENE= }} | ||
===MAJOR COLD-SHOCK PROTEIN FROM ESCHERICHIA COLI SOLUTION NMR STRUCTURE=== | ===MAJOR COLD-SHOCK PROTEIN FROM ESCHERICHIA COLI SOLUTION NMR STRUCTURE=== | ||
{{ABSTRACT_PUBMED_9692981}} | |||
==Function== | |||
[[http://www.uniprot.org/uniprot/CSPA_ECOLI CSPA_ECOLI]] Binds to and stimulates the transcription of the CCAAT-containing, cold-shock-inducible promoters of the H-NS and GyrA proteins. Binds also to the inverted repeat 5'-ATTGG-3'. | |||
-- | |||
==About this Structure== | ==About this Structure== | ||
[[3mef]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_bl21(de3) Escherichia coli bl21(de3)]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1mef 1mef]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MEF OCA]. | |||
==Reference== | ==Reference== | ||
<ref group="xtra">PMID: | <ref group="xtra">PMID:009692981</ref><ref group="xtra">PMID:011734033</ref><ref group="xtra">PMID:016477599</ref><ref group="xtra">PMID:017154716</ref><references group="xtra"/><references/> | ||
[[Category: Feng, W.]] | [[Category: Feng, W.]] | ||
[[Category: Montelione, G T.]] | [[Category: Montelione, G T.]] | ||
| Line 30: | Line 16: | ||
[[Category: Aromatic-base stacking interaction]] | [[Category: Aromatic-base stacking interaction]] | ||
[[Category: Cold-shock protein]] | [[Category: Cold-shock protein]] | ||
[[Category: Gene regulation]] | |||
[[Category: Greek-key topology]] | [[Category: Greek-key topology]] | ||
[[Category: Ob fold]] | [[Category: Ob fold]] | ||
| Line 35: | Line 22: | ||
[[Category: Single-stranded rna/dna binding]] | [[Category: Single-stranded rna/dna binding]] | ||
[[Category: Transcription regulation]] | [[Category: Transcription regulation]] | ||
Revision as of 23:10, 10 April 2013
MAJOR COLD-SHOCK PROTEIN FROM ESCHERICHIA COLI SOLUTION NMR STRUCTURE
Template:ABSTRACT PUBMED 9692981
Function
[CSPA_ECOLI] Binds to and stimulates the transcription of the CCAAT-containing, cold-shock-inducible promoters of the H-NS and GyrA proteins. Binds also to the inverted repeat 5'-ATTGG-3'.
About this Structure
3mef is a 1 chain structure with sequence from Escherichia coli bl21(de3). This structure supersedes the now removed PDB entry 1mef. Full experimental information is available from OCA.
Reference
- Feng W, Tejero R, Zimmerman DE, Inouye M, Montelione GT. Solution NMR structure and backbone dynamics of the major cold-shock protein (CspA) from Escherichia coli: evidence for conformational dynamics in the single-stranded RNA-binding site. Biochemistry. 1998 Aug 4;37(31):10881-96. PMID:9692981 doi:10.1021/bi980269j
- Sharman GJ, Griffiths-Jones SR, Jourdan M, Searle MS. Effects of amino acid phi,psi propensities and secondary structure interactions in modulating H alpha chemical shifts in peptide and protein beta-sheet. J Am Chem Soc. 2001 Dec 12;123(49):12318-24. PMID:11734033
- Huang JT, Tian J. Amino acid sequence predicts folding rate for middle-size two-state proteins. Proteins. 2006 May 15;63(3):551-4. PMID:16477599 doi:10.1002/prot.20911
- Zhang J, Liu JS. On side-chain conformational entropy of proteins. PLoS Comput Biol. 2006 Dec 8;2(12):e168. PMID:17154716 doi:10.1371/journal.pcbi.0020168
