3ppa: Difference between revisions

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~~[[Image:3ppa.jpg|left|200px]]~~

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===Structure of the Dusp-Ubl domains of Usp15===

==Function==

[[http://www.uniprot.org/uniprot/UBP15_HUMAN UBP15_HUMAN]] Hydrolase that removes conjugated ubiquitin from target proteins and regulates various pathways such as the TGF-beta receptor signaling and NF-kappa-B pathways. Acts as a key regulator of TGF-beta receptor signaling pathway, but the precise mechanism is still unclear: according to a report, acts by promoting deubiquitination of monoubiquitinated R-SMADs (SMAD1, SMAD2 and/or SMAD3), thereby alleviating inhibition of R-SMADs and promoting activation of TGF-beta target genes (PubMed:21947082). According to another reports, regulates the TGF-beta receptor signaling pathway by mediating deubiquitination and stabilization of TGFBR1, leading to an enhanced TGF-beta signal (PubMed:22344298). Able to mediate deubiquitination of monoubiquitinated substrates as well as 'Lys-48'-linked polyubiquitin chains, protecting them against proteasomal degradation. Acts as an associated component of COP9 signalosome complex (CSN) and regulates different pathways via this association: regulates NF-kappa-B by mediating deubiquitination of NFKBIA and deubiquitinates substrates bound to VCP. Protects APC and human papillomavirus type 16 protein E6 against degradation via the ubiquitin proteasome pathway.<ref>PMID:16005295</ref> <ref>PMID:17318178</ref> <ref>PMID:19826004</ref> <ref>PMID:19576224</ref> <ref>PMID:19553310</ref> <ref>PMID:21947082</ref> <ref>PMID:22344298</ref>

==About this Structure==

[[3ppa]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PPA OCA].

==Reference==

[[Category: Homo sapiens]]

[[Category: Ubiquitinyl hydrolase 1]]

Line 24:

Line 20:

[[Category: Walker, J R.]]

[[Category: Weigelt, J.]]

[[Category: Cleavage]]

[[Category: Deubiquitinating enzyme]]

[[Category: Deubiquitylation]]

[[Category: Domain-swapping]]

[[Category: Dub]]

[[Category: Dub15]]

[[Category: Dusp]]

[[Category: Endopeptidase]]

[[Category: Hydrolase]]

[[Category: Phosphoprotein]]

[[Category: Protease]]

[[Category: Thiol protease]]

[[Category: Thiolesterase]]

[[Category: Ubiquitin]]

[[Category: Ubiquitin carboxyterminal hydrolase]]

[[Category: Ubiquitin specific protease]]

[[Category: Ubl conjugation pathway]]

[[Category: Ubp15]]

[[Category: Uch]]

[[Category: Usp]]

[[Category: Usp15]]

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-[[Image:3ppa.jpg|left|200px]]
-<!--
-The line below this paragraph, containing "STRUCTURE_3ppa", creates the "Structure Box" on the page.
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-or leave the SCENE parameter empty for the default display.
--->
 {{STRUCTURE_3ppa|  PDB=3ppa  |  SCENE=  }}
 ===Structure of the Dusp-Ubl domains of Usp15===
+==Function==
+[[http://www.uniprot.org/uniprot/UBP15_HUMAN UBP15_HUMAN]] Hydrolase that removes conjugated ubiquitin from target proteins and regulates various pathways such as the TGF-beta receptor signaling and NF-kappa-B pathways. Acts as a key regulator of TGF-beta receptor signaling pathway, but the precise mechanism is still unclear: according to a report, acts by promoting deubiquitination of monoubiquitinated R-SMADs (SMAD1, SMAD2 and/or SMAD3), thereby alleviating inhibition of R-SMADs and promoting activation of TGF-beta target genes (PubMed:21947082). According to another reports, regulates the TGF-beta receptor signaling pathway by mediating deubiquitination and stabilization of TGFBR1, leading to an enhanced TGF-beta signal (PubMed:22344298). Able to mediate deubiquitination of monoubiquitinated substrates as well as 'Lys-48'-linked polyubiquitin chains, protecting them against proteasomal degradation. Acts as an associated component of COP9 signalosome complex (CSN) and regulates different pathways via this association: regulates NF-kappa-B by mediating deubiquitination of NFKBIA and deubiquitinates substrates bound to VCP. Protects APC and human papillomavirus type 16 protein E6 against degradation via the ubiquitin proteasome pathway.<ref>PMID:16005295</ref> <ref>PMID:17318178</ref> <ref>PMID:19826004</ref> <ref>PMID:19576224</ref> <ref>PMID:19553310</ref> <ref>PMID:21947082</ref> <ref>PMID:22344298</ref>
 ==About this Structure==
 [[3ppa]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PPA OCA].
+==Reference==
+<references group="xtra"/><references/>
 [[Category: Homo sapiens]]
 [[Category: Ubiquitinyl hydrolase 1]]
@@ Line 24: / Line 20: @@
 [[Category: Walker, J R.]]
 [[Category: Weigelt, J.]]
+[[Category: Cleavage]]
+[[Category: Deubiquitinating enzyme]]
+[[Category: Deubiquitylation]]
+[[Category: Domain-swapping]]
+[[Category: Dub]]
+[[Category: Dub15]]
+[[Category: Dusp]]
+[[Category: Endopeptidase]]
+[[Category: Hydrolase]]
+[[Category: Phosphoprotein]]
+[[Category: Protease]]
+[[Category: Thiol protease]]
+[[Category: Thiolesterase]]
+[[Category: Ubiquitin]]
+[[Category: Ubiquitin carboxyterminal hydrolase]]
+[[Category: Ubiquitin specific protease]]
+[[Category: Ubl conjugation pathway]]
+[[Category: Ubp15]]
+[[Category: Uch]]
+[[Category: Usp]]
+[[Category: Usp15]]