Helicase: Difference between revisions

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Michal Harel (talk | contribs)
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Michal Harel (talk | contribs)
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[[2is4]], [[2is6]] - EcHel II (mutant) + ADP + DNA<BR />
[[2is4]], [[2is6]] - EcHel II (mutant) + ADP + DNA<BR />
[[3fld]] – EcHel I C terminal<BR />
[[3fld]] – EcHel I C terminal<BR />
[[4l0j]] – EcHel I translocation domain<br />
[[2q7t]], [[2q7u]] – EcHel I relaxase domain (mutant) <BR />
[[2q7t]], [[2q7u]] – EcHel I relaxase domain (mutant) <BR />
[[1p4d]] - EcHel I relaxase domain<BR />
[[1p4d]] - EcHel I relaxase domain<BR />
Line 110: Line 111:


[[3dmq]] – EcHEPA  
[[3dmq]] – EcHEPA  


===ATP-dependent helicase E1===
===ATP-dependent helicase E1===
Line 137: Line 136:
[[2rb4]] – hDDX25 helicase domain<BR />
[[2rb4]] – hDDX25 helicase domain<BR />
[[2p6n]] – hDDX41 helicase domain (mutant) <BR />
[[2p6n]] – hDDX41 helicase domain (mutant) <BR />
[[2e29]] - hDDX50 GUCT domain - NMR<BR />
[[2e29]], [[2m3d]] - hDDX50 GUCT domain - NMR<BR />
[[2rqa]] – hDHX58 C terminal – NMR<BR />
[[2rqa]] – hDHX58 C terminal – NMR<BR />
[[3eqt]] - hDHX58 C terminal + RNA<BR />
[[3eqt]] - hDHX58 C terminal + RNA<BR />
Line 186: Line 185:
===Viral ATP-dependent RNA helicase NS3===
===Viral ATP-dependent RNA helicase NS3===


[[3o8b]], [[3o8d]], [[1cu1]], [[8ohm]], [[1hei]] – HvHel NS3 – Hepatitis C virus<BR />
[[3o8b]], [[3o8d]], [[1cu1]], [[8ohm]], [[1hei]], [[4a92]] – HvHel NS3 – Hepatitis C virus<BR />
[[1onb]], [[1jr6]] - HvHel NS3 arginine-rich domain – NMR<BR />
[[1onb]], [[1jr6]] - HvHel NS3 arginine-rich domain – NMR<BR />
[[2jlq]], [[2bhr]], [[2bmf]] – DvHel NS3 residues 1646-2092 – Dengue virus<BR />
[[2jlq]], [[2bhr]], [[2bmf]], [[2whx]], [[2wzq]] – DvHel NS3 residues 1646-2092 – Dengue virus<BR />
[[2z83]] – Hel NS3 residues 167-624 – Japanese encephalitis virus<BR />
[[2z83]] – Hel NS3 residues 167-624 – Japanese encephalitis virus<BR />
[[2v8o]], [[2wv9]] - Hel NS3 helicase domain – Murray valley encephalitis virus<BR />
[[2v8o]], [[2wv9]] - Hel NS3 helicase domain – Murray valley encephalitis virus<BR />
Line 250: Line 249:


[[3iuo]] – RecQ residues 604-725 – ''Porphyromonas gingivalis''<BR />
[[3iuo]] – RecQ residues 604-725 – ''Porphyromonas gingivalis''<BR />
[[2rhf]]– RecQ HRDC domain 3 – ''Deinococcus radiodurans''<BR />
[[2rhf]] – DrRecQ HRDC domain 3 – ''Deinococcus radiodurans''<BR />
[[2ma1]] - DrRecQ HRDC domain – NMR <br />
[[1wud]] - EcRecQ HRDC domain<BR />
[[1wud]] - EcRecQ HRDC domain<BR />
[[1oyw]] - EcRecQ catalytic domain<BR />
[[1oyw]] - EcRecQ catalytic domain<BR />
Line 292: Line 292:
[[3gxv]] – HpDnaB – ''Helicobacter pylori''<BR />
[[3gxv]] – HpDnaB – ''Helicobacter pylori''<BR />
[[4a1f]] – HpDnaB C terminal<br />
[[4a1f]] – HpDnaB C terminal<br />
[[2vyf]] – GkDnaC – ''Geobacillus kaustophilus''<BR />
[[2r6d]] – BsDnaB – ''Bacillus stearothermophilus''<BR />
[[2r6d]] – BsDnaB – ''Bacillus stearothermophilus''<BR />
[[2r6e]], [[2r6d]] - GsDnaB <BR />
[[2r6e]], [[2r6d]] - GsDnaB <BR />
Line 301: Line 300:
[[1mi8]] – DnaB – ''Synechocystis''<BR />
[[1mi8]] – DnaB – ''Synechocystis''<BR />
[[1b79]] - EcDnaB N terminal<BR />
[[1b79]] - EcDnaB N terminal<BR />
[[1jwe]] - EcDnaB N terminal - NMR<BR />
[[1jwe]] - EcDnaB N terminal - NMR<BR />  
[[2vye]] – GkDnaC + DNA<BR />  
[[2r6c]], [[2r6a]] – BsDnaB + DnaG helicase-binding domain  
[[2r6c]], [[2r6a]] – BsDnaB + DnaG helicase-binding domain  
===DnaC helicase===
[[2vyf]]– GkDnaC – ''Geobacillus kaustophilus''<br />
[[2vye]] – GkDnaC + DNA <br />
[[3ec2]] – AaDnaC – ''Aquifex aeolicus''<br />
[[3ecc]] – AaDnaC + ADP<br />


===Helicase NSP2===
===Helicase NSP2===