Sandbox Reserved 763: Difference between revisions
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===Secondary Structural Elements=== | ===Secondary Structural Elements=== | ||
[[Image:Secondary2iyq.PNG|300px|left|thumb| Secondary Structural Elements<ref name="PDB" />]] Using [[2iyq]] as an example, the secondary structure of shikimate kinase can be observed in terms of strands and helices shown <scene name='56/564039/Helixsheet/1'>here</scene>. There are 5 strands, shown in yellow, and 9 helices, shown in pink. Also shown to the left is the secondary structural content of shikimate kinase (strands are yellow, sheets are pink). | [[Image:Secondary2iyq.PNG|300px|left|thumb| Secondary Structural Elements<ref name="PDB" />]] | ||
Using [[2iyq]] as an example, the secondary structure of shikimate kinase can be observed in terms of strands and helices shown <scene name='56/564039/Helixsheet/1'>here</scene>. There are 5 strands, shown in yellow, and 9 helices, shown in pink. Also shown to the left is the secondary structural content of shikimate kinase (strands are yellow, sheets are pink). | |||
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===Active Residues=== | ===Active Residues=== | ||
There are active residues | [[Image:ActiveResidues2iyq.PNG|300px|left|thumb| Binding Sites<ref name="PDB" />]] | ||
<ref name=" | Using [[2iyq]] as an example, the active residues were binding in shikimate kinase occurs is shown to the left. There are three domains present in Shikimate kinase: the CORE domain, and substrate-binding domain, and LID domain. Each domain plays a role in binding and is related to the active residues. The binding site for nucleotides is in the CORE, shikimate binds in the substrate-binding domain, and once ATP or shikimate binds, the LID domain closes over the active site.<ref name="UniProt">UniProt http://www.uniprot.org/uniprot/P0A4Z2</ref> | ||
