4m47: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{STRUCTURE_4m47| PDB=4m47 | SCENE= }} | {{STRUCTURE_4m47| PDB=4m47 | SCENE= }} | ||
===structure of human DNA polymerase complexed with 8-BrG in the template base paired with incoming non-hydrolyzable GTP=== | ===structure of human DNA polymerase complexed with 8-BrG in the template base paired with incoming non-hydrolyzable GTP=== | ||
{{ABSTRACT_PUBMED_24425881}} | |||
==Function== | ==Function== | ||
| Line 9: | Line 10: | ||
==Reference== | ==Reference== | ||
<references group="xtra"/><references/> | <ref group="xtra">PMID:024425881</ref><references group="xtra"/><references/> | ||
[[Category: Koag, M C.]] | [[Category: Koag, M C.]] | ||
[[Category: Lee, S.]] | [[Category: Lee, S.]] | ||
Revision as of 03:49, 13 February 2014
structure of human DNA polymerase complexed with 8-BrG in the template base paired with incoming non-hydrolyzable GTP
Template:ABSTRACT PUBMED 24425881
Function
[DPOLB_HUMAN] Repair polymerase that plays a key role in base-excision repair. Has 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity that removes the 5' sugar phosphate and also acts as a DNA polymerase that adds one nucleotide to the 3' end of the arising single-nucleotide gap. Conducts 'gap-filling' DNA synthesis in a stepwise distributive fashion rather than in a processive fashion as for other DNA polymerases.[1] [2] [3] [4]
About this Structure
4m47 is a 4 chain structure. Full crystallographic information is available from OCA.
Reference
- Koag MC, Min K, Lee S. Structural basis for promutagenicity of 8-halogenated guanine. J Biol Chem. 2014 Jan 14. PMID:24425881 doi:https://dx.doi.org/10.1074/jbc.M113.537803
- ↑ Bennett RA, Wilson DM 3rd, Wong D, Demple B. Interaction of human apurinic endonuclease and DNA polymerase beta in the base excision repair pathway. Proc Natl Acad Sci U S A. 1997 Jul 8;94(14):7166-9. PMID:9207062
- ↑ Matsumoto Y, Kim K, Katz DS, Feng JA. Catalytic center of DNA polymerase beta for excision of deoxyribose phosphate groups. Biochemistry. 1998 May 5;37(18):6456-64. PMID:9572863 doi:10.1021/bi9727545
- ↑ DeMott MS, Beyret E, Wong D, Bales BC, Hwang JT, Greenberg MM, Demple B. Covalent trapping of human DNA polymerase beta by the oxidative DNA lesion 2-deoxyribonolactone. J Biol Chem. 2002 Mar 8;277(10):7637-40. Epub 2002 Jan 22. PMID:11805079 doi:10.1074/jbc.C100577200
- ↑ Parsons JL, Dianova II, Khoronenkova SV, Edelmann MJ, Kessler BM, Dianov GL. USP47 is a deubiquitylating enzyme that regulates base excision repair by controlling steady-state levels of DNA polymerase beta. Mol Cell. 2011 Mar 4;41(5):609-15. doi: 10.1016/j.molcel.2011.02.016. PMID:21362556 doi:10.1016/j.molcel.2011.02.016
