Sandbox Reserved 186: Difference between revisions

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== Secondary Structure and the Thioredoxin Like Fold ==
== Secondary Structure and the Thioredoxin Like Fold ==
GPx-1 consists of nine β-strand  nine α-helices with four of the helices being of the 310 form.  Interestingly two of the β-strands form a parallel β-sheet. The classic thioredoxin fold consists of a four stranded β-sheet that is surrounded by three α-helices (5).  However the thioredoxin fold is commonly subject to the insertion of additional secondary structural elements between the second β-strand and the second α-helices (6).  This is seen in GPx-1 as there is an addition of an α-helix and a β-strand between the second β-strand and the second α-helices (6).  A similar insertion is found in peroxiredoxins, a different family of proteins which also catalyze the reduction of hydroperoxides (6).[[Image:Beta_sheets3.jpg|300px|left|thumb|]]
GPx-1 consists of nine β-strand  nine α-helices with four of the helices being of the 310 form (Figure 2).  Interestingly two of the β-strands form a parallel β-sheet (Figure 3)[[Image:Beta_sheets3.jpg|300px|left|thumb|]]. The classic thioredoxin fold consists of a four stranded β-sheet that is surrounded by three α-helices (5).  However the thioredoxin fold is commonly subject to the insertion of additional secondary structural elements between the second β-strand and the second α-helices (6).  This is seen in GPx-1 as there is an addition of an α-helix and a β-strand between the second β-strand and the second α-helices (6).  A similar insertion is found in peroxiredoxins, a different family of proteins which also catalyze the reduction of hydroperoxides (6).


== Relevance ==
== Relevance ==

Revision as of 05:04, 30 April 2014

<Structure load='<scene name='58/583431/Gpx-1/1'>Glycine Mutant of Glutathione Peroxidase 1</scene>' size='350' frame='true' align='right' caption='Insert caption here' scene='Insert optional scene name here' />

This Sandbox is Reserved from 4/28/214, through 6/28/214 for use in the course "Proteins" taught by Drew Barber at the Univeristy of Vermont. This reservation includes Sandbox Reserved 186 through Sandbox Reserved 189.
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Glycine Mutant of Glutatione Peroxidase 1

Overview

Glutathione peroxidase 1 (GPx-1) is a tetramer (23 kDa per monomer) with two units composed of dimers. GPx-1 is the most abundant member of the Glutathione peroxidase family. It is found in all cells and is located in the cytosolic and mitochondrial compartments (1). GPx-1 is a crucial anti-oxidant enzyme that catalyzes the conversion of hydrogen peroxide into water (2). Interestingly GPx-1 contains the rare amino acid selenocysteine which acts as the peroxidatic residue (2). The overall reaction that GPx-1 catalyzes is H2O2 + 2Glutathione (GSH) -> 2H20 + GS-SG (Figure 1). In addition to hydrogen peroxide GPx-1 can reduce other soluble hydroperoxides including lipid hydroperoxides (3). Because of its role in regulating the intracellular concentration of reactive oxygen species, GPx-1 has been found to play a role in numerous processes including cell proliferation, apoptosis, and inflammation (1). Furthermore deficiencies in GPx-1 has been linked to the development of cancers, neurodegenerative diseases, and heart disease (4).

Secondary Structure and the Thioredoxin Like Fold

GPx-1 consists of nine β-strand nine α-helices with four of the helices being of the 310 form (Figure 2). Interestingly two of the β-strands form a parallel β-sheet (Figure 3)

. The classic thioredoxin fold consists of a four stranded β-sheet that is surrounded by three α-helices (5). However the thioredoxin fold is commonly subject to the insertion of additional secondary structural elements between the second β-strand and the second α-helices (6). This is seen in GPx-1 as there is an addition of an α-helix and a β-strand between the second β-strand and the second α-helices (6). A similar insertion is found in peroxiredoxins, a different family of proteins which also catalyze the reduction of hydroperoxides (6).

Relevance

Structural highlights

This is a sample scene created with SAT to color by Group, and another to make a transparent representation of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.

</StructureSection>

References