Talk:Resolution: Difference between revisions
From Proteopedia
Jump to navigationJump to search
Eric Martz (talk | contribs) No edit summary |
Eric Martz (talk | contribs) No edit summary |
||
| Line 1: | Line 1: | ||
Proposed revision | Proposed revision for the portion of this article before the ''Contents'', after discussion with Keiichi Namba. Comments welcome! | ||
The resolution of a macromolecular crystal is the smallest distance between crystal lattice planes that is resolved in the diffraction pattern. Thus high numeric values of resolution, such as 4 Å, mean poor resolution, while low numeric values, such as 1.5 Å, mean good resolution. | The resolution of a macromolecular crystal is the smallest distance between crystal lattice planes that is resolved in the diffraction pattern. Thus high numeric values of resolution, such as 4 Å, mean poor resolution, while low numeric values, such as 1.5 Å, mean good resolution. | ||
The | |||
The portion of the macromolecule that is best ordered in the crystal is responsible for diffraction spots that are farthest from the axis of the X-ray beam. Resolution is determined from these farthest spots based on their angle θ from the X-ray beam, using [http://en.wikipedia.org/wiki/Bragg's_law the Bragg equation]: | |||
<center> | <center> | ||
d = λ / (2 sin θ) | d = λ / (2 sin θ) | ||
| Line 11: | Line 12: | ||
If some portions of the macromolecule are less ordered in the crystal than others, these will have a poorer resolution. The "resolution of the crystal" represents the most ordered portions. | If some portions of the macromolecule are less ordered in the crystal than others, these will have a poorer resolution. The "resolution of the crystal" represents the most ordered portions. | ||
After an [[electron density map]] is calculated and refined with a fitted atomic model, an uncertainty of atomic position is calculated for each atom in the model. These single-atom uncertainties are called the B factors or | After an [[electron density map]] is calculated and refined with a fitted atomic model, an uncertainty of atomic position is calculated for each atom in the model. These single-atom uncertainties are called the B factors or temperature values of the atoms (see [[Temperature]]). | ||