1dur: Difference between revisions

Line 1:

~~[[Image:1dur.png|left|200px]]~~

==Replacement for 1FDX 2(4FE4S) ferredoxin from (NOW) Peptostreptococcus asaccharolyticus==

~~{{STRUCTURE_1dur| PDB=1dur | SCENE~~= }}

== Structural highlights ==

<table><tr><td colspan='2'>[[1dur]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Peptoniphilus_asaccharolyticus Peptoniphilus asaccharolyticus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1fdx 1fdx]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DUR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DUR FirstGlance]. <br>

=~~==REPLACEMENT FOR~~ 1FDX 2(4FE4S) ~~FERREDOXIN FROM~~ (NOW) ~~PEPTOSTREPTOCOCCUS ASACCHAROLYTICUS~~===

</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene><br>

<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1fdx|1fdx]]</td></tr>

~~{{ABSTRACT_PUBMED_017291010}}~~

<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dur FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dur OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1dur RCSB], [http://www.ebi.ac.uk/pdbsum/1dur PDBsum]</span></td></tr>

<table>

==~~About this Structure~~==

== Evolutionary Conservation ==

[[1dur]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Peptoniphilus_asaccharolyticus Peptoniphilus asaccharolyticus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1fdx 1fdx]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DUR OCA].

[[Image:Consurf_key_small.gif|200px|right]]

Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/du/1dur_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].

==See Also==

*[[Ferredoxin|Ferredoxin]]

__TOC__

~~==Reference==~~

</StructureSection>

~~<ref group="xtra">PMID:017291010</ref>~~<~~references group="xtra"~~/>

[[Category: Peptoniphilus asaccharolyticus]]

[[Category: Adman, E T.]]

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@@ Line 1: / Line 1: @@
-[[Image:1dur.png|left|200px]]
+==Replacement for 1FDX 2(4FE4S) ferredoxin from (NOW) Peptostreptococcus asaccharolyticus==
+<StructureSection load='1dur' size='340' side='right' caption='[[1dur]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-{{STRUCTURE_1dur|  PDB=1dur  |  SCENE=  }}
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1dur]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Peptoniphilus_asaccharolyticus Peptoniphilus asaccharolyticus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1fdx 1fdx]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DUR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DUR FirstGlance]. <br>
-===REPLACEMENT FOR 1FDX 2(4FE4S) FERREDOXIN FROM (NOW) PEPTOSTREPTOCOCCUS ASACCHAROLYTICUS===
+</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene><br>
+<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1fdx|1fdx]]</td></tr>
-{{ABSTRACT_PUBMED_017291010}}
+<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dur FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dur OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1dur RCSB], [http://www.ebi.ac.uk/pdbsum/1dur PDBsum]</span></td></tr>
+<table>
-==About this Structure==
+== Evolutionary Conservation ==
-[[1dur]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Peptoniphilus_asaccharolyticus Peptoniphilus asaccharolyticus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1fdx 1fdx]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DUR OCA].
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/du/1dur_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
 ==See Also==
 *[[Ferredoxin|Ferredoxin]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:017291010</ref><references group="xtra"/>
 [[Category: Peptoniphilus asaccharolyticus]]
 [[Category: Adman, E T.]]