2dby: Difference between revisions

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[[Image:2dby.png|left|200px]]
==Crystal structure of the GTP-binding protein YchF in complexed with GDP==
 
<StructureSection load='2dby' size='340' side='right' caption='[[2dby]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
{{STRUCTURE_2dby|  PDB=2dby  |  SCENE=  }}
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2dby]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DBY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DBY FirstGlance]. <br>
===Crystal structure of the GTP-binding protein YchF in complexed with GDP===
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene><br>
 
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dby FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dby OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2dby RCSB], [http://www.ebi.ac.uk/pdbsum/2dby PDBsum], [http://www.topsan.org/Proteins/RSGI/2dby TOPSAN]</span></td></tr>
==About this Structure==
<table>
[[2dby]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DBY OCA].  
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/2dby_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[GTP-binding protein|GTP-binding protein]]
*[[GTP-binding protein|GTP-binding protein]]
__TOC__
</StructureSection>
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Kukimoto-Niino, M.]]
[[Category: Kukimoto-Niino, M.]]

Revision as of 03:33, 29 September 2014

Crystal structure of the GTP-binding protein YchF in complexed with GDP

2dby, resolution 1.76Å

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