3gm6: Difference between revisions

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~~[[Image:3gm6.png|left|200px]]~~

==Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with phosphate==

~~{{STRUCTURE_3gm6| PDB=3gm6 | SCENE= }}~~

== Structural highlights ==

<table><tr><td colspan='2'>[[3gm6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thioalkalivibrio_nitratireducens Thioalkalivibrio nitratireducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GM6 FirstGlance]. <br>

===Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with phosphate===

</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene><br>

<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ot4|2ot4]], [[3f29|3f29]]</td></tr>

<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gm6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gm6 RCSB], [http://www.ebi.ac.uk/pdbsum/3gm6 PDBsum]</span></td></tr>

==~~About this Structure~~==

<table>

[[3gm6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thioalkalivibrio_nitratireducens Thioalkalivibrio nitratireducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM6 OCA].

== Evolutionary Conservation ==

[[Image:Consurf_key_small.gif|200px|right]]

Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gm6_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].

==See Also==

*[[Nitric reductase|Nitric reductase]]

__TOC__

</StructureSection>

[[Category: Thioalkalivibrio nitratireducens]]

[[Category: Boyko, K M.]]

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@@ Line 1: / Line 1: @@
-[[Image:3gm6.png|left|200px]]
+==Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with phosphate==
+<StructureSection load='3gm6' size='340' side='right' caption='[[3gm6]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-{{STRUCTURE_3gm6|  PDB=3gm6  |  SCENE=  }}
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3gm6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thioalkalivibrio_nitratireducens Thioalkalivibrio nitratireducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GM6 FirstGlance]. <br>
-===Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with phosphate===
+</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene><br>
+<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ot4|2ot4]], [[3f29|3f29]]</td></tr>
+<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gm6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gm6 RCSB], [http://www.ebi.ac.uk/pdbsum/3gm6 PDBsum]</span></td></tr>
-==About this Structure==
+<table>
-[[3gm6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thioalkalivibrio_nitratireducens Thioalkalivibrio nitratireducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM6 OCA].
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gm6_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
 ==See Also==
 *[[Nitric reductase|Nitric reductase]]
+__TOC__
+</StructureSection>
 [[Category: Thioalkalivibrio nitratireducens]]
 [[Category: Boyko, K M.]]