Ribosome 3D structures: Difference between revisions

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===30S subunit + RNA===
===30S subunit + RNA===


[[2zm6]], [[1n36]], [[1j5e]], [[3oto]] - Tt30S ribosomal subunit+THX+16S RRNA – Thermus thermophiles<br />
[[2zm6]], [[1n36]], [[1j5e]], [[3oto]] - Tt30S ribosomal subunit+THX+16S RRNA – ''Thermus thermophiles''<br />
[[2vqe]], [[2vqf]], [[2uuc]], [[2e5l]], [[2uu9]], [[2uua]], [[2uub]], [[3pyn]], [[3pyq]], [[3pys]], [[3pyu]] - Tt30S ribosomal subunit+16S RRNA+RNA fragment<br />
[[2vqe]], [[2vqf]], [[2uuc]], [[2e5l]], [[2uu9]], [[2uua]], [[2uub]], [[3pyn]], [[3pyq]], [[3pys]], [[3pyu]] - Tt30S ribosomal subunit+16S RRNA+RNA fragment<br />
[[3kc4]] - Ec30S ribosomal subunit - Escherichia coli<br />
[[3kc4]] - ''E. coli'' 30S ribosomal subunit - Escherichia coli<br />
[[3i1m]], [[3i1o]], [[3df1]], [[3df3]], [[2vho]], [[2vhp]], [[2avy]], [[2aw7]], [[1pnx]] - Ec30S ribosomal subunit+16S RRNA<br />
[[3i1m]], [[3i1o]], [[3df1]], [[3df3]], [[2vho]], [[2vhp]], [[2avy]], [[2aw7]], [[1pnx]] - ''E. coli'' 30S ribosomal subunit+16S RRNA<br />
[[1i94]], [[1fka]], [[3uxs]], [[3uxt]], [[4dr1]] -  Tt30S ribosomal subunit+16S RRNA<br />
[[1i94]], [[1fka]], [[3uxs]], [[3uxt]], [[4dr1]] -  Tt30S ribosomal subunit+16S RRNA<br />
[[4duy]], [[4duz]], [[4dv0]], [[4dv1]], [[4dv2]], [[4dv3]], [[4dv4]], [[4dv5]], [[4dv6]], [[4dv7]] - Tt30S ribosomal subunit+16S RRNA (mutant)<br />
[[4duy]], [[4duz]], [[4dv0]], [[4dv1]], [[4dv2]], [[4dv3]], [[4dv4]], [[4dv5]], [[4dv6]], [[4dv7]] - Tt30S ribosomal subunit+16S RRNA (mutant)<br />
[[4dr4]], [[4b3m]], [[4b3r]], [[4b3s]], [[4b3t]] - Tt30S ribosomal subunit+16S RRNA + mRNA<br />
[[4dr4]], [[4b3m]], [[4b3r]], [[4b3s]], [[4b3t]] - Tt30S ribosomal subunit+16S RRNA + mRNA<br />
[[1p87]] - Ec30S ribosomal subunit+16S RRNA – Cryo-EM<br />
[[1p87]] - ''E. coli'' 30S ribosomal subunit+16S RRNA – Cryo-EM<br />
[[3bbn]] - s30S ribosomal subunit+16S RRNA – Cryo-EM – spinach<br />
[[3bbn]] - ''Spinacia oleracea'' (spinach) 30S ribosomal subunit+16S RRNA – Cryo-EM – spinach<br />


=== 30S subunit + chain release factor===
=== 30S subunit + chain release factor===
Line 32: Line 32:
[[3zn7]], [[3znd]] - Tt30S ribosomal subunit+16S RRNA+A-site tRNA Ile agmatidine + E-site tRNA Ile agmatidine + mRNA<br />
[[3zn7]], [[3znd]] - Tt30S ribosomal subunit+16S RRNA+A-site tRNA Ile agmatidine + E-site tRNA Ile agmatidine + mRNA<br />
[[3uz6]], [[3uz7]], [[3uzg]], [[3uzi]] - Tt30S ribosomal subunit+16S RRNA+tRNA Tyr + tRNA fMet + mRNA<br />
[[3uz6]], [[3uz7]], [[3uzg]], [[3uzi]] - Tt30S ribosomal subunit+16S RRNA+tRNA Tyr + tRNA fMet + mRNA<br />
[[2i2p]], [[2i2u]] - Ec30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA<br />
[[2i2p]], [[2i2u]] - ''E. coli'' 30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA<br />
[[2hgr]], [[3v6u]], [[3v6v]], [[4ej9]], [[4eja]] - Tt30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet+mRNA<br />
[[2hgr]], [[3v6u]], [[3v6v]], [[4ej9]], [[4eja]] - Tt30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet+mRNA<br />
[[1yl4]] – Tt30S ribosomal subunit+ tRNA Phe+16S RRNA+THRS mRNA operator<br />
[[1yl4]] – Tt30S ribosomal subunit+ tRNA Phe+16S RRNA+THRS mRNA operator<br />
[[1pns]] - Ec30S ribosomal subunit+ tRNA Phe+16S RRNA+mRNA <br />
[[1pns]] - ''E. coli'' 30S ribosomal subunit+ tRNA Phe+16S RRNA+mRNA <br />
[[3j13]] - Ec30S ribosomal subunit+ P-site tRNA +16S RRNA+mRNA – Cryo-EM<br />
[[3j13]] - ''E. coli'' 30S ribosomal subunit+ P-site tRNA +16S RRNA+mRNA – Cryo-EM<br />
[[3j0u]], [[3j0v]], [[3j0x]], [[3j0z]], [[3j10]], [[3j20]] - Ec30S ribosomal subunit+ A-site tRNA + P-site tRNA +16S RRNA+mRNA – Cryo-EM<br />
[[3j0u]], [[3j0v]], [[3j0x]], [[3j0z]], [[3j10]], [[3j20]] - Ec30S ribosomal subunit+ A-site tRNA + P-site tRNA +16S RRNA+mRNA – Cryo-EM<br />
[[1xnq]], [[1xnr]] - Tt30S ribosomal subunit+THX+mRNA+tRNA anticodon+16S RRNA<br />
[[1xnq]], [[1xnr]] - Tt30S ribosomal subunit+THX+mRNA+tRNA anticodon+16S RRNA<br />
Line 55: Line 55:
[[3i8h]], [[3i9b]], [[3i9d]] - Tt30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA<br />
[[3i8h]], [[3i9b]], [[3i9d]] - Tt30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA<br />
[[1ibk]] - Tt30S ribosomal subunit+THX+P-site mRNA fragment +16S RRNA<br />
[[1ibk]] - Tt30S ribosomal subunit+THX+P-site mRNA fragment +16S RRNA<br />
[[2wwl]] - Ec30S ribosomal subunit+Poly-Ala chain+P-site tRNA+mRNA +16S RRNA <br />
[[2wwl]] - ''E. coli'' 30S ribosomal subunit+Poly-Ala chain+P-site tRNA+mRNA +16S RRNA <br />
[[3i1q]] - Ec30S ribosomal subunit+P-site tRNA hairpin+mRNA <br />
[[3i1q]] - ''E. coli''30S ribosomal subunit+P-site tRNA hairpin+mRNA <br />
[[3i1s]], [[3i1z]], [[3i21]] - Ec30S ribosomal subunit+P-site tRNA hairpin+mRNA +16S RNA<br />
[[3i1s]], [[3i1z]], [[3i21]] - Ec30S ribosomal subunit+P-site tRNA hairpin+mRNA +16S RNA<br />
[[2om7]] – TtRPS2+TtRPS12+TtRPL1+ P-site tRNA+16S RRNA fragment+23S RRNA fragment<br />
[[2om7]] – TtRPS2+TtRPS12+TtRPL1+ P-site tRNA+16S RRNA fragment+23S RRNA fragment<br />
Line 73: Line 73:
===30S subunit+A-site tRNA+P-site tRNA+E-site tRNA===
===30S subunit+A-site tRNA+P-site tRNA+E-site tRNA===


[[2gy9]], [[2gyb]] -  Ec30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA – Cryo-EM<br />
[[2gy9]], [[2gyb]] -  ''E. coli'' 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA – Cryo-EM<br />
[[1jgo]], [[1jgp]], [[1jgq]], [[1gix]] -  Tt30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+tRNA Phe+mRNA +16S RRNA<br />
[[1jgo]], [[1jgp]], [[1jgq]], [[1gix]] -  Tt30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+tRNA Phe+mRNA +16S RRNA<br />
[[4k0p]] - Tt30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA +mRNA +16S RRNA<br />
[[4k0p]] - Tt30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA +mRNA +16S RRNA<br />
[[3e1a]], [[3e1c]] -  Ec30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA<br />
[[3e1a]], [[3e1c]] -  'E. coli'' 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA<br />


===30S subunit + antibiotics===
===30S subunit + antibiotics===
Line 83: Line 83:
[[1hnx]], [[1hnw]], [[1hnz]], [[1fjg]], [[4aqy]], [[4dr5]], [[4dr6]], [[4dr7]], [[4khp]] - Tt30S ribosomal subunit+16S RRNA+mRNA fragment+antibiotic <br />
[[1hnx]], [[1hnw]], [[1hnz]], [[1fjg]], [[4aqy]], [[4dr5]], [[4dr6]], [[4dr7]], [[4khp]] - Tt30S ribosomal subunit+16S RRNA+mRNA fragment+antibiotic <br />
[[2qbb]], [[2qb9]], [[1vs5]], [[1vs7]] , [[2qan]], [[2qal]], [[2qou]], [[2qow]], [[2qoy,]] [[2qp0]], [[2z4k]], [[2z4m]], [[3oaq]], [[3oar]], [[3ofa]], [[3ofb]], [[3ofo]], [[3ofp]], [[3ofx]], [[3ofy]], [[3or9]], [[3ora]] - Ec30S ribosomal subunit+16S RRNA+antibiotic<br />
[[2qbb]], [[2qb9]], [[1vs5]], [[1vs7]] , [[2qan]], [[2qal]], [[2qou]], [[2qow]], [[2qoy,]] [[2qp0]], [[2z4k]], [[2z4m]], [[3oaq]], [[3oar]], [[3ofa]], [[3ofb]], [[3ofo]], [[3ofp]], [[3ofx]], [[3ofy]], [[3or9]], [[3ora]] - Ec30S ribosomal subunit+16S RRNA+antibiotic<br />
[[4gaq]], [[4gas]] - Ec30S ribosomal subunit+16S RRNA+ mRNA + antibiotic<br />
[[4gaq]], [[4gas]] - ''E. coli'' 30S ribosomal subunit+16S RRNA+ mRNA + antibiotic<br />
[[3sfs]] - Ec30S ribosomal subunit+16S RRNA+ mRNA + RF-3 + antibiotic<br />
[[3sfs]] - Ec30S ribosomal subunit+16S RRNA+ mRNA + RF-3 + antibiotic<br />
[[2j00]], [[2j02]] - Tt30S ribosomal subunit+16S RRNA+paromomycin+P-site tRNA fMet+E-site tRNA Phe+mRNA<br />
[[2j00]], [[2j02]] - Tt30S ribosomal subunit+16S RRNA+paromomycin+P-site tRNA fMet+E-site tRNA Phe+mRNA<br />
Line 93: Line 93:
===30S subunit + ribosome recycling factor===
===30S subunit + ribosome recycling factor===


[[2qbd]], [[2qbf]] - Ec30S ribosomal subunit+16S RRNA+ribosome recycling factor<br />
[[2qbd]], [[2qbf]] -''E. coli''30S ribosomal subunit+16S RRNA+ribosome recycling factor<br />
[[3r8n]], [[3r8o]], [[4gd1]], [[4gd2]] - Ec30S ribosomal subunit+16S RRNA+ribosome recycling factor + mRNA + tRNA<br />
[[3r8n]], [[3r8o]], [[4gd1]], [[4gd2]] - Ec30S ribosomal subunit+16S RRNA+ribosome recycling factor + mRNA + tRNA<br />
[[2qbh]], [[2qbj]] - Ec30S ribosomal subunit+16S RRNA+ribosome recycling factor+gentamicin<br />
[[2qbh]], [[2qbj]] - ''E. coli'' 30S ribosomal subunit+16S RRNA+ribosome recycling factor+gentamicin<br />
[[2v46]], [[2v48]] -  Tt30S ribosomal subunit+16S RRNA+ribosome recycling factor+P-site tRNA Phe+mRNA+tRNA fMet<br />
[[2v46]], [[2v48]] -  Tt30S ribosomal subunit+16S RRNA+ribosome recycling factor+P-site tRNA Phe+mRNA+tRNA fMet<br />


Line 105: Line 105:
[[4abr]] - Tt30S ribosomal subunit+THX + E/P-site tRNA fMet +mRNA codon+16S RRNA+elongation factor TU<br />
[[4abr]] - Tt30S ribosomal subunit+THX + E/P-site tRNA fMet +mRNA codon+16S RRNA+elongation factor TU<br />
[[2y0u]], [[2y0w]], [[2y0y]], [[2y12]], [[2y10]], [[2y18]], [[2y14]], [[2y16]] - Tt30S ribosomal subunit+THX+A-site tRNA+E-site tRNA+mRNA codon+16S RRNA+elongation factor TU<br />
[[2y0u]], [[2y0w]], [[2y0y]], [[2y12]], [[2y10]], [[2y18]], [[2y14]], [[2y16]] - Tt30S ribosomal subunit+THX+A-site tRNA+E-site tRNA+mRNA codon+16S RRNA+elongation factor TU<br />
[[3fih]] - Ec30S ribosomal subunit+A-site tRNA Phe+P-site tRNA+mRNA +16S RRNA+elongation factor TU<br />
[[3fih]] - ''E. coli'' 30S ribosomal subunit+A-site tRNA Phe+P-site tRNA+mRNA +16S RRNA+elongation factor TU<br />
[[3izv]] - Ec30S ribosomal subunit+A/T-site tRNA Phe +16S RRNA+elongation factor TU<br />
[[3izv]] - ''E. coli'' 30S ribosomal subunit+A/T-site tRNA Phe +16S RRNA+elongation factor TU<br />
[[3j18]] - Ec30S ribosomal subunit+A/T-site tRNA Phe +16S RRNA+ mRNA + SSRA-binding protein + formyl-Met specific initiator tRNA + elongation factor G – Cryo-EM<br />
[[3j18]] - ''E. coli'' 30S ribosomal subunit+A/T-site tRNA Phe +16S RRNA+ mRNA + SSRA-binding protein + formyl-Met specific initiator tRNA + elongation factor G – Cryo-EM<br />
[[3izw]] - Ec30S ribosomal subunit+A-site tRNA Phe +mRNA +16S RRNA+elongation factor TU<br />
[[3izw]] - ''E. coli'' 30S ribosomal subunit+A-site tRNA Phe +mRNA +16S RRNA+elongation factor TU<br />
[[3huw]], [[3huy]] - Tt30S ribosomal subunit+THX+tRNA-Met+mRNA +16S RRNA+elongation factor P<br />
[[3huw]], [[3huy]] - Tt30S ribosomal subunit+THX+tRNA-Met+mRNA +16S RRNA+elongation factor P<br />
[[4b8f]], [[4b8h]] - Tt30S ribosomal subunit+THX+RNA+mRNA +16S RRNA+elongation factor G<br />
[[4b8f]], [[4b8h]] - Tt30S ribosomal subunit+THX+RNA+mRNA +16S RRNA+elongation factor G<br />
Line 114: Line 114:
[[4juw]] - Tt30S ribosomal subunit+THX+ tRNA Phe +16S RRNA + mRNA +elongation factor G<br />
[[4juw]] - Tt30S ribosomal subunit+THX+ tRNA Phe +16S RRNA + mRNA +elongation factor G<br />
[[4kbt]], [[4kbv]], [[4kcy]], [[4kd0]], [[4kd8]], [[4kda]] - Tt30S ribosomal subunit+THX+ tRNA Met +16S RRNA + mRNA + viomycin + elongation factor G<br />
[[4kbt]], [[4kbv]], [[4kcy]], [[4kd0]], [[4kd8]], [[4kda]] - Tt30S ribosomal subunit+THX+ tRNA Met +16S RRNA + mRNA + viomycin + elongation factor G<br />
[[4kiy]], [[4kj0]], [[4kj2]], [[4kj4]], [[4kj6]], [[4kj8]], [[4kja]], [[4kjc]] - Ec30S ribosomal subunit +16S RRNA + viomycin + elongation factor G<br />
[[4kiy]], [[4kj0]], [[4kj2]], [[4kj4]], [[4kj6]], [[4kj8]], [[4kja]], [[4kjc]] - ''E. coli'' 30S ribosomal subunit +16S RRNA + viomycin + elongation factor G<br />


===30S subunit + translation initiation factor===
===30S subunit + translation initiation factor===
Line 126: Line 126:
[[2xfz]], [[2xg1]] - Tt30S ribosomal subunit+colicin-E3 fragment+16S RRNA+mRNA+E-site tRNA+THX<br />
[[2xfz]], [[2xg1]] - Tt30S ribosomal subunit+colicin-E3 fragment+16S RRNA+mRNA+E-site tRNA+THX<br />
[[1voq]], [[1vos]] , [[1vov]], [[1vox]], [[1voz]] - Ec30S ribosomal subunit+protein Y+16S RRNA<br />
[[1voq]], [[1vos]] , [[1vov]], [[1vox]], [[1voz]] - Ec30S ribosomal subunit+protein Y+16S RRNA<br />
[[3j36]] - Ec30S ribosomal subunit+ tetracycline resistance protein +16S RRNA + mRNA + P-tRNA – Cryo-EM<br />
[[3j36]] - ''E. coli'' 30S ribosomal subunit+ tetracycline resistance protein +16S RRNA + mRNA + P-tRNA – Cryo-EM<br />
[[1x18]] – TtRPS2+TtRPS7+TtRPS11+TtRPS18+GTP-binding protein ERA+RNA fragments<br />
[[1x18]] – TtRPS2+TtRPS7+TtRPS11+TtRPS18+GTP-binding protein ERA+RNA fragments<br />
[[4dh9]], [[4dhb]] - Tt30S ribosomal subunit +16S RRNA+mRNA+P-site tRNA fMet +THX + YAEJ<br />
[[4dh9]], [[4dhb]] - Tt30S ribosomal subunit +16S RRNA+mRNA+P-site tRNA fMet +THX + YAEJ<br />
[[3v22]], [[3v24]], [[3v26]], [[3v28]] - Tt30S ribosomal subunit +16S RRNA +THX + modulation factor<br />
[[3v22]], [[3v24]], [[3v26]], [[3v28]] - Tt30S ribosomal subunit +16S RRNA +THX + modulation factor<br />
[[3v2c]], [[3v2e]] - Tt30S ribosomal subunit +16S RRNA +THX + ribosome-associated inhibitor<br />
[[3v2c]], [[3v2e]] - Tt30S ribosomal subunit +16S RRNA +THX + ribosome-associated inhibitor<br />
[[3j00]] – EcRPS2 + 16S RRNA + FTSQ + apolipoprotein A-I<br />
[[3j00]] – ''E. coli'' RPS2 + 16S RRNA + FTSQ + apolipoprotein A-I<br />
[[2ykr]] - EcRPS2 + 16S RRNA + GMPPNP + GTPase RSGA<br />
[[2ykr]] - ''E. coli'' RPS2 + 16S RRNA + GMPPNP + GTPase RSGA<br />
[[4a2i]] - EcRPS2 + 16S RRNA + GTPase RSGA – Cryo EM<br />
[[4a2i]] - ''E. coli'' RPS2 + 16S RRNA + GTPase RSGA – Cryo EM<br />
[[3uoq]] - EcRPS2 + 16S RRNA + mRNA + peptide chain release factor<br />
[[3uoq]] - ''E. coli'' RPS2 + 16S RRNA + mRNA + peptide chain release factor<br />
[[4adv]] - EcRPS2 + 16S RRNA + methyltransferase – Cryo EM<br />
[[4adv]] - ''E. coli'' RPS2 + 16S RRNA + methyltransferase – Cryo EM<br />


===40S ribosomal subunit===  
===40S ribosomal subunit===  
Line 141: Line 141:
[[3jyv]] - Tl40S ribosomal subunit+RACK1+S19E+P-site tRNA – Thermomyces lanuginosus<br />
[[3jyv]] - Tl40S ribosomal subunit+RACK1+S19E+P-site tRNA – Thermomyces lanuginosus<br />
[[2xzm]], [[2xzn]] - Tet40S ribosomal subunit+RACK1 – Tetrahymena thermophila<br />
[[2xzm]], [[2xzn]] - Tet40S ribosomal subunit+RACK1 – Tetrahymena thermophila<br />
[[1s1h]] - y40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM – yeast<br />
[[1s1h]] - ''Saccharomyces cerevisiae'' (yeast) 40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM – yeast<br />
[[3izb]] - y40S ribosomal subunit+ RACK1 – Cryo-EM<br />
[[3izb]] - ''Saccharomyces cerevisiae'' (yeast) 40S ribosomal subunit+ RACK1 – Cryo-EM<br />
[[3o2z]], [[3o30]] - y40S ribosomal subunit+ RACK1<br />
[[3o2z]], [[3o30]] - ''Saccharomyces cerevisiae'' (yeast) 40S ribosomal subunit+ RACK1<br />
[[3u5c]], [[3u5g]] - y40S ribosomal subunit+ RACK1 + suppressor protein SMT1<br />
[[3u5c]], [[3u5g]] - ''Saccharomyces cerevisiae'' (yeast) 40S ribosomal subunit+ RACK1 + suppressor protein SMT1<br />
[[3iz6]] - w40S ribosomal subunit+RACK1 – wheat<br />
[[3iz6]] - w40S ribosomal subunit+RACK1 – wheat<br />
[[3j38]] - Dm40S ribosomal subunit + EF-2 + guanine nucleotide-binding protein – Drosophila melanogaster – Cryo-EM<br />
[[3j38]] - Dm40S ribosomal subunit + EF-2 + guanine nucleotide-binding protein – Drosophila melanogaster – Cryo-EM<br />
Line 160: Line 160:
[[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – Tt50S subunit+RNA fragments<br />
[[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – Tt50S subunit+RNA fragments<br />
[[3fin]], [[2xtg]], [[2xux]] - Tt50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
[[3fin]], [[2xtg]], [[2xux]] - Tt50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
[[2wwq]] – Ec 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA <br />
[[2wwq]] – ''E. coli'' 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA <br />
[[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3ofd]], [[3og0]], [[3oas]], [[3oat]], [[3uos]], [[3r8s]], [[3r8t]], [[3j37]], [[4kix]], [[4kiz]], [[4kj1]], [[4kj3]], [[4kj5]], [[4kj7]], [[4kj9]], [[4kjb]] - Ec50S subunit+5S RRNA+23S RRNA <br />
[[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3ofd]], [[3og0]], [[3oas]], [[3oat]], [[3uos]], [[3r8s]], [[3r8t]], [[3j37]], [[4kix]], [[4kiz]], [[4kj1]], [[4kj3]], [[4kj5]], [[4kj7]], [[4kj9]], [[4kjb]] - Ec50S subunit+5S RRNA+23S RRNA <br />
[[3fik]], [[2gya]], [[2gyc]], [[1p85]], [[1p86]], [[3izt]], [[3izu]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3j19]] -  Ec50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
[[3fik]], [[2gya]], [[2gyc]], [[1p85]], [[1p86]], [[3izt]], [[3izu]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3j19]] -  Ec50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
[[3kcr]] - Ec50S subunit+5S RRNA+23S RRNA+preprotein translocase<br />
[[3kcr]] - ''E. coli'' 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br />
[[3bbo]] -  s50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM <br />
[[3bbo]] -  s50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM <br />
[[2zjq]], [[2zjr]], [[1nkw]] - Dr50S subunit+5S RRNA+23S RRNA – Deinococcus radiodurans<br />
[[2zjq]], [[2zjr]], [[1nkw]] - Dr50S subunit+5S RRNA+23S RRNA – Deinococcus radiodurans<br />
Line 175: Line 175:
[[1vq6]], [[1vqk]], [[1vqn]] – Hm50S subunit+5S RRNA+23S RRNA+ c-hpmn+CCA-Phe-caproic acid-biotin<br />
[[1vq6]], [[1vqk]], [[1vqn]] – Hm50S subunit+5S RRNA+23S RRNA+ c-hpmn+CCA-Phe-caproic acid-biotin<br />
[[1vqo]] – Hm50S subunit+5S RRNA+23S RRNA+ CCPMN<br />
[[1vqo]] – Hm50S subunit+5S RRNA+23S RRNA+ CCPMN<br />
[[3iy9]] – 50S subunit – Leishmania taretolae<br />
[[3iy9]] – 50S subunit – ''Leishmania taretolae''<br />
[[2ftc]] – 50S subunit+5S RRNA+23S RRNA – bovine - Cryo_EM<br />
[[2ftc]] – 50S subunit+5S RRNA+23S RRNA – bovine - Cryo_EM<br />
[[3j21]] –  50S subunit + P0 + LX – Pyrococcus furiosus – Cryo EM<br />
[[3j21]] –  50S subunit + P0 + LX – ''Pyrococcus furiosus'' – Cryo EM<br />
[[3j3v]], [[3j3w]] - 50S subunit+5S RRNA+23S RRNA – Bacillus subtilis<br />
[[3j3v]], [[3j3w]] - 50S subunit+5S RRNA+23S RRNA – Bacillus subtilis<br />


Line 191: Line 191:


[[3jyw]] -  60S subunit – Thermomyces lanuginosus – Cryo-EM<br />
[[3jyw]] -  60S subunit – Thermomyces lanuginosus – Cryo-EM<br />
[[1s1i]], [[1s1h]] - y60S ribosomal subunit+ 5.8S RRNA+ 5S RRNA – Cryo-EM <br />
[[1s1i]], [[1s1h]] - ''Saccharomyces cerevisiae'' (yeast) 60S ribosomal subunit+ 5.8S RRNA+ 5S RRNA – Cryo-EM <br />
[[3izs]] - y60S subunit – Cryo-EM<br />
[[3izs]] - ''Saccharomyces cerevisiae'' (yeast) 60S subunit – Cryo-EM<br />
[[3u5e]], [[3u5i]] - y60S subunit <br />
[[3u5e]], [[3u5i]] - ''Saccharomyces cerevisiae'' (yeast) 60S subunit <br />
[[3o58]], [[3o5h]] - y60S ribosomal subunit+ 5.8S RRNA+ 5S RRNA + 25S RRNA<br />
[[3o58]], [[3o5h]] - ''Saccharomyces cerevisiae'' (yeast) 60S ribosomal subunit+ 5.8S RRNA+ 5S RRNA + 25S RRNA<br />
[[3izr]], [[3izt]], [[3izu]], [[3izs]] - w60S subunit <br />
[[3izr]], [[3izt]], [[3izu]], [[3izs]] - w60S subunit <br />
[[3j39]] – Dm60S subunit – Cryo-EM<br />
[[3j39]] – Dm60S subunit – Cryo-EM<br />
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[[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - Ec50S subunit+5S RRNA+23S RRNA+RRF<br />
[[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - Ec50S subunit+5S RRNA+23S RRNA+RRF<br />
[[2rdo]] - Ec50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<br />
[[2rdo]] - ''E. coli''50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<br />
[[3j0d]] - Tt50S subunit+5S RRNA+23S RRNA+RRF – Cryo-EM<br />
[[3j0d]] - Tt50S subunit+5S RRNA+23S RRNA+RRF – Cryo-EM<br />


=== 50S subunit + various proteins===
=== 50S subunit + various proteins===


[[2vhm]] - Ec50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br />
[[2vhm]] - ''E. coli'' 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br />
[[2j28]] - Ec50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<br />
[[2j28]] - ''E. coli'' 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<br />
[[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]] - Ec50S subunit+5S RRNA+23S RRNA+general stress protein Ctc<br />
[[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]] - Ec50S subunit+5S RRNA+23S RRNA+general stress protein Ctc<br />
[[3j01]] - Ec 50S subunit+5S RRNA+23S RRNA + SECYE – Cryo-EM<br />
[[3j01]] - ''E. coli'' 50S subunit+5S RRNA+23S RRNA + SECYE – Cryo-EM<br />
[[1w2b]] - Hm50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal<br />
[[1w2b]] - Hm50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal<br />


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[[4a18]], [[4a19]], [[4a1b]], [[4a1d]] - Tet60S subunit+ 26S RRNA+ translation initiation factor 6 <br />
[[4a18]], [[4a19]], [[4a1b]], [[4a1d]] - Tet60S subunit+ 26S RRNA+ translation initiation factor 6 <br />
[[3izs]] – y60S subunit + P0 + P1 + P2 - Cryo EM<br />
[[3izs]] – ''Saccharomyces cerevisiae'' (yeast) 60S subunit + P0 + P1 + P2 - Cryo EM<br />
[[3u5i]] – y60S subunit + P0<br />
[[3u5i]] – ''Saccharomyces cerevisiae'' (yeast) 60S subunit + P0<br />
[[4b6a]] – y60S subunit + P0 + P1 + P2 + ARX1 - Cryo EM<br />
[[4b6a]] – ''Saccharomyces cerevisiae'' (yeast) 60S subunit + P0 + P1 + P2 + ARX1 - Cryo EM<br />
[[3o5h]] – y60S subunit + 5S RRNA + 5.8S RRNA + 25S RRNA + P0<br />
[[3o5h]] – ''Saccharomyces cerevisiae'' (yeast) 60S subunit + 5S RRNA + 5.8S RRNA + 25S RRNA + P0<br />
[[3j39]] – Dm60S subunit + P0 – Drosophila melanogaster - Cryo EM<br />
[[3j39]] – Dm60S subunit + P0 – Drosophila melanogaster - Cryo EM<br />
[[3j3b]] – h60S subunit + P0 + P1 + P2 – human - Cryo EM<br />
[[3j3b]] – h60S subunit + P0 + P1 + P2 – human - Cryo EM<br />
Retrieved from "https://proteopedia.org/Ribosome_3D_structures"