1tp3: Difference between revisions

Line 1:

~~[[Image:1tp3.png|left|200px]]~~

==PDZ3 domain of PSD-95 protein complexed with KKETPV peptide ligand==

~~{{STRUCTURE_1tp3| PDB=1tp3 | SCENE= }}~~

== Structural highlights ==

<table><tr><td colspan='2'>[[1tp3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TP3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TP3 FirstGlance]. <br>

===PDZ3 domain of PSD-95 protein complexed with KKETPV peptide ligand===

</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DLG4, DLGH4, PSD95 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Rattus norvegicus])</td></tr>

<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tp3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tp3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tp3 RCSB], [http://www.ebi.ac.uk/pdbsum/1tp3 PDBsum]</span></td></tr>

<table>

==~~About this Structure~~==

== Evolutionary Conservation ==

[[1tp3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TP3 OCA].

[[Image:Consurf_key_small.gif|200px|right]]

Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tp/1tp3_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].

__TOC__

</StructureSection>

[[Category: Rattus norvegicus]]

[[Category: Griffin, A.]]

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@@ Line 1: / Line 1: @@
-[[Image:1tp3.png|left|200px]]
+==PDZ3 domain of PSD-95 protein complexed with KKETPV peptide ligand==
+<StructureSection load='1tp3' size='340' side='right' caption='[[1tp3]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
-{{STRUCTURE_1tp3|  PDB=1tp3  |  SCENE=  }}
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1tp3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TP3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TP3 FirstGlance]. <br>
-===PDZ3 domain of PSD-95 protein complexed with KKETPV peptide ligand===
+</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DLG4, DLGH4, PSD95 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Rattus norvegicus])</td></tr>
+<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tp3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tp3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tp3 RCSB], [http://www.ebi.ac.uk/pdbsum/1tp3 PDBsum]</span></td></tr>
+<table>
-==About this Structure==
+== Evolutionary Conservation ==
-[[1tp3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TP3 OCA].
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tp/1tp3_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Rattus norvegicus]]
 [[Category: Griffin, A.]]