User:Wayne Decatur/Sequence analysis tools: Difference between revisions

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==Converters==
==Converters==
* [ALTER ALignment Transformation EnviRonment http://sing.ei.uvigo.es/ALTER/] - complex interface but offers lots of options for output. I used it as part of my workflow to get closer to special NEXUS format (or intermediate) for performing maximum likelihood phylogenetic analysis of large sets of sequences.
* [http://sing.ei.uvigo.es/ALTER/ ALTER (ALignment Transformation EnviRonment)] - complex interface but offers lots of options for output. I used it as part of my workflow to get closer to special NEXUS format (or intermediate) for performing maximum likelihood phylogenetic analysis of large sets of sequences.
* [Sequence conversion Provided by bugaco.com http://sequenceconversion.bugaco.com/converter/biology/sequences/clustal_to_fasta.php] - a lot of conversion choices with easy interface. When I had interleaved clustal format it converted nicely to a straight fasta listing for the sequence for every organism.
* [http://sequenceconversion.bugaco.com/converter/biology/sequences/clustal_to_fasta.php Sequence conversion Provided by bugaco.com] - a lot of conversion choices with easy interface. When I had interleaved clustal format it converted nicely to a straight fasta listing for the sequence for every organism.


==Random sequence generators==
==Random sequence generators==
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