1k3k: Difference between revisions

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[[Image:1k3k.gif|left|200px]]<br /><applet load="1k3k" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:1k3k.gif|left|200px]]
caption="1k3k" />
 
'''Solution Structure of a Bcl-2 Homolog from Kaposi's Sarcoma Virus'''<br />
{{Structure
|PDB= 1k3k |SIZE=350|CAPTION= <scene name='initialview01'>1k3k</scene>
|SITE=  
|LIGAND=  
|ACTIVITY=  
|GENE=
}}
 
'''Solution Structure of a Bcl-2 Homolog from Kaposi's Sarcoma Virus'''
 


==Overview==
==Overview==
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==About this Structure==
==About this Structure==
1K3K is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Human_herpesvirus_4 Human herpesvirus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K3K OCA].  
1K3K is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Human_herpesvirus_4 Human herpesvirus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K3K OCA].  


==Reference==
==Reference==
Solution structure of a Bcl-2 homolog from Kaposi sarcoma virus., Huang Q, Petros AM, Virgin HW, Fesik SW, Olejniczak ET, Proc Natl Acad Sci U S A. 2002 Mar 19;99(6):3428-33. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=11904405 11904405]
Solution structure of a Bcl-2 homolog from Kaposi sarcoma virus., Huang Q, Petros AM, Virgin HW, Fesik SW, Olejniczak ET, Proc Natl Acad Sci U S A. 2002 Mar 19;99(6):3428-33. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11904405 11904405]
[[Category: Human herpesvirus 4]]
[[Category: Human herpesvirus 4]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: solution structure]]
[[Category: solution structure]]


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Revision as of 10:12, 20 March 2008

File:1k3k.gif


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1k3k
Coordinates: save as pdb, mmCIF, xml



Solution Structure of a Bcl-2 Homolog from Kaposi's Sarcoma Virus


Overview

Kaposi sarcoma-associated herpes virus (KSHV) contains a gene that has functional and sequence homology to the apoptotic Bcl-2 family of proteins [Sarid, R., Sato, T., Bohenzky, R. A., Russo, J. J. & Chang, Y. (1997) Nat. Med. 3, 293-298]. The viral Bcl-2 protein promotes survival of infected cells and may contribute to the development of Kaposi sarcoma tumors [Boshoff, C. & Chang, Y. (2001) Annu. Rev. Med. 52, 453-470]. Here we describe the solution structure of the viral Bcl-2 homolog from KSHV. Comparison of the KSHV Bcl-2 structure to that of Bcl-2 and Bcl-x(L) shows that although the overall fold is the same, there are key differences in the lengths of the helices and loops. Binding studies on peptides derived from the Bcl-2 homology region 3 of proapoptotic family members indicate that the specificity of the viral protein is very different from what was previously observed for Bcl-x(L) and Bcl-2, suggesting that the viral protein has evolved to have a different mechanism of action than the host proteins.

About this Structure

1K3K is a Single protein structure of sequence from Human herpesvirus 4. Full crystallographic information is available from OCA.

Reference

Solution structure of a Bcl-2 homolog from Kaposi sarcoma virus., Huang Q, Petros AM, Virgin HW, Fesik SW, Olejniczak ET, Proc Natl Acad Sci U S A. 2002 Mar 19;99(6):3428-33. PMID:11904405

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