3k5w: Difference between revisions

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{{STRUCTURE_3k5w|  PDB=3k5w  |  SCENE=  }}
==Crystal structure of a Carbohydrate kinase (YjeF family)from Helicobacter pylori==
===Crystal structure of a Carbohydrate kinase (YjeF family)from Helicobacter pylori===
<StructureSection load='3k5w' size='340' side='right' caption='[[3k5w]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
 
== Structural highlights ==
==About this Structure==
<table><tr><td colspan='2'>[[3k5w]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K5W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K5W FirstGlance]. <br>
[[3k5w]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K5W OCA].  
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
[[Category: Helicobacter pylori]]
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Burley, S K.]]
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">900323 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=210 Helicobacter pylori])</td></tr>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k5w OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3k5w RCSB], [http://www.ebi.ac.uk/pdbsum/3k5w PDBsum]</span></td></tr>
[[Category: Satyanarayana, L.]]
</table>
[[Category: Swaminathan, S.]]
== Evolutionary Conservation ==
[[Category: 11206b]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Carbohydrate kinase]]
Check<jmol>
[[Category: Helicobacter pylori]]
  <jmolCheckbox>
[[Category: Kinase]]
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/3k5w_consurf.spt"</scriptWhenChecked>
[[Category: New york sgx research center for structural genomic]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Nysgxrc]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Pfkb family]]
  </jmolCheckbox>
[[Category: Protein structure initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
[[Category: Psi-ii]]
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Sad]]
[[Category: Sad]]
[[Category: Structural genomic]]
[[Category: Transferase]]
Retrieved from "https://proteopedia.org/3k5w"