3lop: Difference between revisions
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==Crystal structure of substrate-binding periplasmic protein (Pbp) from Ralstonia solanacearum== | |||
<StructureSection load='3lop' size='340' side='right' caption='[[3lop]], [[Resolution|resolution]] 1.55Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3lop]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ralstonia_solanacearum Ralstonia solanacearum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LOP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LOP FirstGlance]. <br> | |||
== | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=LEU:LEUCINE'>LEU</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr> | ||
[[3lop]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ralstonia_solanacearum Ralstonia solanacearum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LOP OCA]. | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RSIPO_02814 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=305 Ralstonia solanacearum])</td></tr> | |||
== | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lop FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lop OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3lop RCSB], [http://www.ebi.ac.uk/pdbsum/3lop PDBsum]</span></td></tr> | ||
< | </table> | ||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lo/3lop_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Ralstonia solanacearum]] | [[Category: Ralstonia solanacearum]] | ||
[[Category: Burley, S K | [[Category: Burley, S K]] | ||
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
[[Category: Palani, K]] | |||
[[Category: Swaminathan, S]] | |||
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | |||
[[Category: Substrate binding protein]] | [[Category: Substrate binding protein]] | ||
[[Category: Substrate-binding]] | [[Category: Substrate-binding]] | ||
Revision as of 13:38, 6 November 2014
Crystal structure of substrate-binding periplasmic protein (Pbp) from Ralstonia solanacearum
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