3m7v: Difference between revisions
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==Crystal structure of phosphopentomutase from streptococcus mutans== | |||
<StructureSection load='3m7v' size='340' side='right' caption='[[3m7v]], [[Resolution|resolution]] 2.00Å' scene=''> | |||
== Structural highlights == | |||
== | <table><tr><td colspan='2'>[[3m7v]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_mutans Streptococcus mutans]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2i09 2i09]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M7V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3M7V FirstGlance]. <br> | ||
[[ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">deoB, SMU_1233 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1309 Streptococcus mutans])</td></tr> | |||
== | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphopentomutase Phosphopentomutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.2.7 5.4.2.7] </span></td></tr> | ||
[[3m7v]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_mutans Streptococcus mutans]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2i09 2i09]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M7V OCA]. | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3m7v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m7v OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3m7v RCSB], [http://www.ebi.ac.uk/pdbsum/3m7v PDBsum]</span></td></tr> | ||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m7/3m7v_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Phosphopentomutase]] | [[Category: Phosphopentomutase]] | ||
[[Category: Streptococcus mutans]] | [[Category: Streptococcus mutans]] | ||
[[Category: Almo, S C | [[Category: Almo, S C]] | ||
[[Category: Bonanno, J | [[Category: Bonanno, J]] | ||
[[Category: Burley, S K | [[Category: Burley, S K]] | ||
[[Category: Fedorov, A A | [[Category: Fedorov, A A]] | ||
[[Category: Fedorov, E V | [[Category: Fedorov, E V]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Isomerase]] | [[Category: Isomerase]] | ||
[[Category: Manganese]] | [[Category: Manganese]] | ||
[[Category: Metal-binding]] | [[Category: Metal-binding]] | ||
[[Category: Nysgrc]] | [[Category: Nysgrc]] | ||
[[Category: | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
[[Category: Protein structure initiative | [[Category: PSI, Protein structure initiative]] | ||
Revision as of 13:56, 6 November 2014
Crystal structure of phosphopentomutase from streptococcus mutans
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