3dld: Difference between revisions
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==Crystal structure of peptide deformylase, Xoo1075, from Xanthomonas oryzae pv. oryzae KACC10331== | |||
<StructureSection load='3dld' size='340' side='right' caption='[[3dld]], [[Resolution|resolution]] 2.60Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3dld]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DLD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DLD FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">def, XOO1075 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=64187 Xanthomonas oryzae pv. oryzae])</td></tr> | |||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide_deformylase Peptide deformylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.88 3.5.1.88] </span></td></tr> | |||
== | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dld FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dld OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dld RCSB], [http://www.ebi.ac.uk/pdbsum/3dld PDBsum]</span></td></tr> | ||
[[3dld]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DLD OCA]. | </table> | ||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dl/3dld_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Peptide deformylase]] | [[Category: Peptide deformylase]] | ||
[[Category: Xanthomonas oryzae pv. oryzae]] | [[Category: Xanthomonas oryzae pv. oryzae]] | ||
[[Category: Jung, J H | [[Category: Jung, J H]] | ||
[[Category: Kang, L W | [[Category: Kang, L W]] | ||
[[Category: Kim, J K | [[Category: Kim, J K]] | ||
[[Category: Ngo, H P.T | [[Category: Ngo, H P.T]] | ||
[[Category: Bacterial blight]] | [[Category: Bacterial blight]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Xanthomonas oryzae pv. oryzae kacc10331]] | [[Category: Xanthomonas oryzae pv. oryzae kacc10331]] | ||
[[Category: Xoo1075]] | [[Category: Xoo1075]] | ||
Revision as of 08:00, 12 November 2014
Crystal structure of peptide deformylase, Xoo1075, from Xanthomonas oryzae pv. oryzae KACC10331
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