Bacteriorhodopsin: Difference between revisions

===Bacteriorhodopsin===

[[3ns0]], [[3nsb]], [[3mbv]], [[1x0s]], [[1x0i]], [[1x0k]], [[1xji]], [[1iw6]], [[4fpd]], [[2i1x]], [[1kme]], [[1qm8]], [[1bm1]], [[1brr]], [[2brd]], [[4hyx]]– HsBr residues 14-261 + lipid + retinal – ''Halobacterium salinarum''<br />

[[3vhz]] - HsBr (mutant) + lipid + retinal<br />

[[2wjk]], [[2wjl]] - HsBr residues 14-261 (mutant) + lipid + retinal<br />

[[3han]], [[2hao]], [[3hap]], [[3haq]], [[3har]], [[3has]], [[3coc]], [[3cod]], [[1tn5]], [[1tn0]], [[1s51]], [[1s52]], [[1s53]], [[1s54]], [[1q5i]], [[1q5j]], [[1pxr]], [[1pxs]], [[3hao]], [[3utv]], [[3utw]], [[3utx]], [[3uty]] - HsBr residues 14-261 (mutant) + retinal<br />

[[2ntu]], [[1py6]], [[1fbb]], [[1fbk]], [[1brx]], [[1ap9]], [[1at9]] - HsBr residues 14-261 + retinal<br />

[[2at9]] - HsBr residues 14-261 + lipid + retinal – Cryo EM<br />

[[1brd]] - HsBr residues 14-261 + retinal – Cryo EM<br />

[[1s8j]], [[3t45]] - HsBr residues 14-261 (mutant) + lipid + NO3 + retinal<br />

[[1mgy]] - HsBr residues 14-261 (mutant) + lipid + Br + retinal<br />

[[1s8l]] - HsBr residues 14-261 (mutant) + lipid + retinal<br />

[[1qhj]] - HsBr residues 14-261 + phytanyl derivavative + retinal<br />

[[4hwl]] – HsBr + heptane + hexane + retinal<br />

[[4hwl]] – HsBr + decane + hexane + tetradecane + octane + retinal<br />

[[1r84]], [[1r2n]] - HsBr residues 1-232 + retinal – NMR<BR />

[[1bct]] - HsBr residues 163-231 – NMR<BR />

[[1bha]], [[1bhb]] - HsBr residues 1-71 - NMR<BR />

[[1l0m]] – Br (mutant) – ''Halobacterium halobium'' - NMR<BR />

===Bacteriorhodopsin intermediates===

[[1f50]], [[1c8r]] - HsBr-BR residues 18-244 (mutant) + lipid + retinal<br />

[[1c3w]] - HsBr-BR residues 5-231 + lipid + retinal<br />

[[2zfe]] – HsBr-K residues 14-261 + lipid + retinal<br />

[[1m0k]], [[1m0l]], [[1ixf]] - HsBr-K residues 1-261 + lipid + retinal<br />

[[1m0m]] - HsBr-M1 residues 1-261 + lipid + retinal<br />

[[1e0p]], [[2ntw]], [[1vjm]] - HsBr-L residues 18-245 + retinal<br />

[[1ucq]], [[1iw9]], [[1o0a]] – HsBr-L residues 14-261 + lipid + retinal<br />

[[1kg8]], [[1kg9]], [[1kgb]], [[1dze]], [[1cwq]], [[2zzl]], [[2i20]], [[2i21]], [[1p8h]] - HsBr-M residues 13-243 + lipid + retinal<br />

[[1f4z]], [[1c8s]], [[1p8i]] - HsBr-M residues 18-244 (mutant) + lipid + retinal<br />

[[1p8u]] – HsBr-N residues 14-261 (mutant) + lipid + retinal<br />

[[1jv6]], [[1jv7]], [[3vi0]] - HsBr-O residues 1-261 (mutant) + lipid + retinal<br />

[[1qko]], [[1qkp]] - HsBr residues 14-261 + retinal<br />

===Halorhodopsin===

[[3abw]], [[3a7k]], [[3vvk]] – NpBr+ N3 + bacterioruberin + detergent + retinal – ''Natronomonas pharaonis''<br />

[[3qbg]], [[3qbi]], [[3qbk]], [[3qbl]] - NpBr + bacterioruberin + detergent + retinal<br />

[[2jaf]], [[2jag]], [[1e12]] - HsBr (mutant) + lipid+ retinal<br />

===Sensory rhodopsin II===

[[2ksy]] – NpBr – NMR<BR />

[[2f93]], [[2f95]], [[1h2s]] - BpBr + Br transducer + detergent + retinal<br />

[[3qap]], [[3qdc]] - NpBr + eicosane + lipid + retinal<br />

[[4gyc]] - NpBr + retinal + eicosane + lipid + Br transducer<br />

[[1gu8]], [[1gue]], [[1h68]], [[1jgj]] - NpBr + retinal<br />

[[1xio]] - Br + detergent + retinal - ''Anabaena''

===Xanthorhodopsin===

[[3ddl]] – Br + detergent + salinixanthin + retinal – ''Salinibacter ruber''

===Archaerhodopsin===