Cytochrome c: Difference between revisions

===Cytochrome C===

[[3nwv]], [[3zoo]] – hCyt (mutant) – human<BR />

[[1j3s]] – hCyt - NMR<BR />

[[3nbs]], [[3nbt]], [[1crc]], [[1hrc]], [[3o1y]], [[3o20]], [[3wc8]] – hoCyt – horse<BR />

[[1lc1]], [[1lc2]], [[1m60]], [[1giw]], [[2giw]], [[1akk]], [[2frc]], [[1ocd]] – hoCyt – NMR<BR />

[[1fi9]], [[1fi7]] - hoCyt + imidazole – NMR<BR />

[[1u75]] - hoCyt + Cyt peroxidase<BR />

[[1wej]] – hoCyt + Fab fragment<BR />

[[3a9f]] – CtCyt C-terminal – ''Chlorobaculum tepidum''<BR />

[[3cp5]] – Cyt residues 29-152 – ''Rhodothermus marinus''<BR />

[[2jti]], [[3tyi]] – yCyt (mutant) + Cyt peroxidase – yeast<BR />

[[2pcb]] - yCyt + Cyt peroxidase<BR />

[[2gb8]] - yCyt + Cyt peroxidase - NMR<BR />

[[2jqr]] - yCyt (mutant) + adrenodoxin<BR />

[[2orl]] - yCyt (mutant) – NMR<BR />

[[1crg]], [[1crh]], [[1cri]], [[1crj]], [[ 2ycc]] - yCyt<BR />

[[1ytc]], [[1cie]], [[1cif]], [[1cig]], [[1cih]], [[1csu]], [[1csv]], [[1csw]], [[1csx]], [[1chh]], [[1chi]], [[1chj]], [[1cty]], [[1ctz]] - yCyt (mutant) <BR />

[[1rap]], [[1raq]], [[1ycc]]- yCyt iso-1<BR />

[[1yic]] – yCyt iso-1 – NMR<BR />

[[1irv]], [[1irw]], [[1lms]] – yCyt iso-1 (mutant) <BR />

[[2hv4]], [[2lir]], [[2lit]] - yCyt iso-1 (mutant) - NMR<br />

[[1fhb]] - yCyt iso-1 (mutant) + CN - NMR<BR />

[[1nmi]] – yCyt iso-1 + imidazole<BR />

[[2b0z]], [[2b10]], [[2b11]], [[2b12]], [[1u74]], [[1s6v]], [[2bcn]] – yCyt iso-1 (mutant) + Cyt peroxidase<BR />

[[2pcc]] – yCyt iso-1 + Cyt peroxidase<BR />

[[1yea]], [[1yeb]] – yCyt iso-2<BR />

[[2e84]] – DvCyt – ''Desulfovibrio vulgaris''<BR />

[[2j7a]] – DvCyt catalytic + electron donor subunits<BR />

[[2oz1]] – RsuCyt – ''Rhodovulum sulfidophilum''<BR />

[[1h31]], [[1h32]], [[1h33]] – RsuCyt diheme<br />

[[2aiu]] – Cyt – mouse<BR />

[[2fw5]], [[2fwt]] – RsCyt diheme residues 1-139 - ''Rhodobacter sphaeroides''<BR />

[[1dw0]], [[1dw3]] - RsCyt diheme residues 1-112<BR />

[[1dw1]], [[1dw2]] - RsCyt diheme residues 1-112 + small molecule<BR />

[[1ogy]] - RsCyt diheme residues 25-154 + nitrate reductase catalytic subunit<BR />

[[2a3m]], [[2a3p]] – DdCyt tetraheme membrane-bound subunit - ''Desulfovibrio desulfuricans''<BR />

[[1h21]] - DdCyt di-heme<BR />

[[1ofw]], [[1ofy]], [[1duw]], [[19hc]] - DdCyt nine-heme<BR />

[[1oah]] - DdCyt<BR />

[[2b4z]] – bCyt – bovine<BR />

[[1lfm]], [[1i55]], [[3cyt]], [[1i54]], [[1i5t]] -  Cyt – tuna<BR />

[[1fs7]], [[1fs8]], [[1fs9]] – WsCyt + small molecule – ''Wolinella succinogenes''<BR />

[[1dxr]] – RvCyt in photosynthetic reaction center – ''Rhodopseudomonas viridis''<BR />

[[1qdb]] – Cyt – ''Sulfurospirillum deleyianum''<BR />

[[5cyt]] – Cyt - albacore<br />

[[2ccy]] – Cyt – ''Phaeospirillum molischianum''<br />

[[4dy9]] – Cyt – ''Leishmania major''<br />

[[3u99]] – Cyt diheme – ''Shewanella baltica''<br />

[[3j2t]] – Cyt + apoptotic protease-activating factor 1 – bovine – Cryo EM<br />

===Cytochrome C’===

[[2xl6]], [[2xld]], [[2xle]], [[2xlo]], [[2xlv]], [[2xlw]] – AxCyt (mutant) + NO – ''Achromobacter xylosoxidans''<BR />

[[1cgn]], [[1cgo]], [[2ykz]], [[3zqv]], [[2ylj]] - AxCyt<BR />

[[2xm0]], [[2xm4]], [[2xl8]], [[2xlh]], [[2yl0]], [[2yl7]], [[3ztm]] - AxCyt (mutant) <BR />  

[[2yl1]], [[2yl3]], [[2ylg]], [[3zqy]], [[3ztz]] - AxCyt (mutant) + CO<br />

[[2yld]], [[3zwi]] - AxCyt + CO<br />

[[2xlm]] - AxCyt + NO<BR />

[[2j9b]], [[2j8w]] – Cyt – ''Rubrivivax gelatinosus''<BR />

[[1gqa]] – RsCyt<BR />

[[1mqv]], [[1a7v]] – RpCyt – ''Rhodopseudomonas palustris''<BR />

[[1eky]] – RcCyt]] - ''Rhodobacter capsulatus'' – NMR<BR />

[[1cpr]], [[1cpq]], [[1rcp]] – RcCyt<BR />

[[1nbb]] – RcCyt + cyanide<BR />

[[1e83]], [[1e84]], [[1e85]], [[1e86]] – Cyt - ''Alcaligenes xylosoxidans''<BR />

[[1jaf]] – Cyt – ''Rhodocyclus gelatinosus''<BR />

[[1bbh]] – Cyt – ''Allochromatium vinosum''<br />

[[3vcr]] - CtCyt<br />

[[3vrc]] – Cyt – ''Thermochromatium tepidum''<br />

===Cytochrome C’’===

[[1oae]], [[1gu2]] – MmCyt – ''Methylophilus methylotrophus''<BR />

[[1e8e]] – MmCyt - NMR<BR />

===Cytochrome C1===

[[3cx5]], [[3cxh]] – yCyt in complex III<BR />

[[2ibz]] - yCyt in complex III + inhibitor<BR />

[[1kyo]] - yCyt in Bc1 complex<BR />

[[1kb9]] – yCyt in Bc1 complex residues 17-368<BR />

[[1ezv]] - yCyt in Bc1 complex + antibody FV fragment<BR />

[[3h1h]], [[1bcc]] - cCyt in Bc1 complex – chicken<BR />

[[3h1i]], [[2bcc]], [[3bcc]] - cCyt in Bc1 complex + inhibitor<BR />

[[2qjk]], [[2qjp]], [[2qjy]] – RsCyt in Bc1 complex + inhibitor<BR />  

[[2fyn]] - RsCyt in Bc1 complex (mutant) <BR />

[[1l0n]], [[1be3]], [[1bgy]], [[1qcr]] – bCyt in Bc1 complex<BR />

[[2fyu]] - bCyt in Bc1 complex (mutant) + inhibitor<BR />  

[[1sqp]], [[1sqq]], [[1sqv]], [[1sqx]], [[2a06]], [[1sqb]], [[1pp9]], [[1ppj]], [[1ntk]], [[1ntm]], [[1p84]], [[1l0l]] - bCyt in Bc1 complex + inhibitor<BR />

[[1ntz]], [[1nu1]] - bCyt in Bc1 complex + substrate<BR />

[[1zrt]] - RcCyt in Bc1 complex + inhibitor<br />

[[2yiu]] - PdCyt in Bc1 complex – ''Paracoccus denitrificans''  

===Cytochrome C2===

[[1c2r]] - RcCyt<BR />

[[1vyd]] – RcCyt (mutant) <BR />

[[1c2n]] – RcCyt - NMR<BR />

[[1l9b]], [[1l9j]] – RsCyt in photosynthetic reaction center<BR />

[[2cxb]], [[1cxc]], [[1cxa]] - RsCyt<BR />

[[1jdl]] – Cyt – ''Rhodospirillum centenum''<BR />

[[2c2c]], [[3c2c]] – Cyt – ''Rhodospirillum rubrum''<BR />

[[1i8o]], [[1hh7]], [[1fj0]], [[1i8p]] – RpCyt<BR />

[[1hro]] – Cyt – ''Rhodopila globiformis''<BR />

[[1cot]] – PdCyt - ''Paracoccus denitrificans''<BR />

[[1cry]] - RvCyt<br />

[[1co6]], [[1io3]] – BvCyt - ''Blastochloris viridis''

===Cytochrome C3===

[[2ksu]], [[1up9]], [[1upd]], [[1gmb]], [[1gm4]], [[1i77]], [[3cyr]] – DdCyt<BR />  

[[2kmy]] – DdCyt – NMR<BR />

[[2k3v]] – Cyt – ''Shewanella frigidimarina''<BR />

[[1m1p]], [[1m1r]], [[1m1q]] - SoCyt tetraheme – ''Shewanella oneidensis''<BR />

[[3pmq]] - SoCyt decaheme<br />

[[1it1]] – DvCyt<br />

[[2bpn]] – DvCyt fragment - NMR<br />

[[1j0o]], [[2cth]], [[2cdv]] - DvCyt tetraheme<BR />

[[2z47]], [[2yyw]], [[2yyx]], [[2yxc]], [[2ffn]], [[2ewi]], [[2ewk]], [[2ewu]], [[1wr5]], [[1j0p]], [[1mdv]], [[2cym]] – DvCyt tetraheme (mutant) <BR />

[[1gx7]] – DvCyt + hydrogenase<BR />

[[1gyo]], [[1wad]], [[1qn0]], [[1qn1]] - DgCyt di-tetraheme – ''Desulfovibrio gigas''<BR />

[[1z1n]] - DgCyt sixteen heme<br />

[[2bq4]], [[3cao]], [[3car]] – Cyt – ''Desulfovibrio africanus''<BR />

[[1w7o]] - Cyt – ''Desulfomicrobium baculatus''<BR />

[[1aqe]] – DnCyt (mutant) – ''Desulfomicrobium norvegicum''<br />

[[1czj]], [[2cy3]] - DnCyt<br />

[[1a2i]] - DvCyt<br />

[[2ldo]] – GsCyt residues 21-91 – ''Geobacter sulfurreducens'' - NMR<br />

[[2izz]] - GsCyt residues 21-91 (mutant) – NMR<br />

[[3ov0]] – GsCyt residues 26-343 dodedcaheme<br />

[[3ouq]] - GsCyt residues 26-186 hexaheme<br />

[[3oue]] - GsCyt residues 186-343 hexaheme

===Cytochrome C4===

[[1m6z]], [[1m70]], [[1etp]] – PsCyt – ''Pseudomonas stutzeri''<BR />

[[1h1o]] – Cyt - ''Acidithiobacillus ferrooxidans''

===Cytochrome C5===

[[1cc5]] – Cyt – ''Azotobacter vinelandii''

===Cytochrome C6===

[[3ph2]] – PlCyt (mutant) – ''Phormidium laminosum''<BR />

[[3dr0]], [[4eic]], [[4eie]] – SyCyt – ''Synechococcus''<BR />

[[4eid]], [[4eif]] – SyCyt (mutant)<br />

[[3dmi]] – Cyt – ''Phaeodactylum tricornutum''<BR />

[[2zbo]] – Cyt – ''Hizikia fusiformis''<BR />

[[2v07]], [[2dge]] – AtCyt residues 71-175 – ''Arabidopsis thaliana''<BR />

[[2ce0]], [[2ce1]] - AtCyt residues 71-175 (mutant) <BR />

[[2v08]] – PlCyt <BR />

[[1ls9]] – Cyt – ''Cladophora glomerata''<BR />

[[1kib]], [[1f1f ]]– AmCyt – ''Arthrospira maxima''<BR />

[[1gdv]] – Cyt – ''Porphyra yezoensis''<BR />

[[1a2s]], [[1ced]] – MbCyt – ''Monoraphidium braunii'' – NMR<BR />

[[1ctj]] - MbCyt<BR />

[[1c6s]] – Cyt – ''Cyanobacterium synechococcus'' - NMR<BR />

[[1c6o]], [[1c6r]] – Cyt – ''Scenedesmus obliquus''<br />

[[1ccr]] – Cyt - rice<br />

[[4gyd]] – noCyt – nostoc<br />

[[4h0j]], [[4h0k]] – noCyt (mutant) <br />

===Cytochrome C7===

[[3h33]], [[3h34]], [[3h4n]], [[3bxu]] – GsCyt <BR />

[[1lm2]], [[1l3o]], [[1kwj]], [[1f22]], [[1ehj]] – DaCyt – ''Deulfurmonas acetoxidans'' – NMR<BR />

[[1hh5]] - DaCyt

===Cytochrome C549===

[[1f1c]] – AmCyt<BR />

[[1e29]] - SyCyt

===Cytochrome C550===

[[3arc]], [[3prq]], [[3prr]], [[3kzi]], [[3a0b]], [[3a0h]], [[3bz1]], [[3bz2]], [[1izl]] – Cyt in photosystem II – ''Thermosynechococcus vulcanus''<BR />

[[2axt]], [[1w5c]], [[1s5l]] - TeCyt in photosystem II – ''Thermosynechococcus elongatus''<BR />

[[2bgv]] – PvCyt – ''Paracoccus versutus''<BR />

[[2bh4]], [[2bh5]] – PvCyt (mutant) <BR />

[[1mz4]] – TeCyt<BR />

[[155c]] - PdCyt

===Cytochrome C551===

[[2zon]] – AxCyt + nitrite reductase<BR />

[[2gc7]], [[2gc4]], [[2mta]] – PdCyt + methylamine dehydrogenase + amicyanin<BR />

[[1cch]], [[1cor]] – PsCyt - NMR<BR />  

[[1gks]] – Cyt – ''Ectothiorhodospira halophila'' - NMR<BR />

[[1new]] – DaCyt triheme]- NMR<BR />

[[2exv]] – PaCyt (mutant) – ''Pseudomonas aeruginosa''<BR />

[[351c]], [[451c]] - PaCyt<BR />

[[2pac]] – PaCyt - NMR<BR />

[[1dvv]] - PaCyt (mutant) – NMR<BR />

[[1fi3]], [[2i8f]] - PsCyt (mutant) – NMR

===Cytochrome C552===

===Cytochrome C553===

[[1b7v]], [[1c75]] – BpCyt - ''Bacillus pasteuri''<BR />

[[1k3h]], [[1k3g]] – BpCyt – NMR<BR />

[[1e08]] – DdCyt + hydrogenase - NMR<BR />

[[1n9c]] – Cyt – ''Sporosarcina pasteurii''<BR />

[[1c53]] - DvCyt<BR />

[[1dvh]] - DvCyt - NMR<br />

[[2dvh]] - DvCyt (mutant) - NMR<BR />

[[1dwl]] – DvCyt + ferredoxin I – NMR<BR />

[[1cyi]], [[1cyj]] – Cyt – ''Chlamydomonas reinhardtii''

===Cytochrome C554===

[[2zzs]] – Cyt – ''Vibrio parahaemolyticus''<BR />

[[1ft5]], [[1ft6]], [[1bvb]] – Cyt – ''Nitrosomonas europaea''

===Cytochrome C555===

[[2zxy]] – Cyt – ''Aquifex aeolicus''<BR />

[[2w9k]], [[2yk3]] – Cyt – ''Crithidia fasciculate''<br />

[[4j20]] – CtCyt (mutant)<br />

===Cytochrome C556===

[[1s05]] – RpCyt - NMR<BR />

===Cytochrome C558===

[[2x5u]], [[2x5v]] – BvCyt in photosynthetic reaction center – ''Blastochloris viridis'' – Laue<BR />

[[2wjm]], [[2wjn]], [[3g7f]], [[3d38]], [[2jbl]], [[2i5n]], [[1vrn]], [[1r2c]] - BvCyt in photosynthetic reaction center  

===Cytochrome C562===

[[3qvz]] – EcCyt + Cu + Zn  

===Cytochrome C NAPB===

[[3ml1]], [[3o5a]] – Cyt + nitrate reductase catalytic subunit – ''Ralstonia eutropha''<br />

[[1jni]] – Cyt small subunit – ''Haemophilus influenzae''

===Cytochrome CL===

[[2d0w]] – Cyt – ''Hyphomicrobium denitrificans''<BR />

[[2c8s]] – MeCyt – ''Methylobacterium extorquens''<br />

[[1mg2]], [[1mg3]] – PdCyt + methylamine hydrogenase + amicyanin<br />

===Cytochrome CC3===

[[2cvc]], [[1gws]], [[1h29]] – DvCyt

===Cytochrome CD1===

[[1gq1]], [[1h9x]], [[1h9y]], [[1hcm]], [[1qks]] – Cyt – ''Paracoccus pantotrophus''<BR />

[[1gjq ]]– PaCyt<BR />  

[[1dy7]] – PaCyt + CO<BR />

[[1e2r]] – PdCyt + CN  

===Cytochrome CH===

[[1qn2]] – MeCyt  

===Cytochrome CB562===