3g80: Difference between revisions

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[[Image:3g80.png|left|200px]]
==Nodamura virus protein b2, RNA-binding domain==
<StructureSection load='3g80' size='340' side='right' caption='[[3g80]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3g80]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Nodamura_virus Nodamura virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G80 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3G80 FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">B2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=12288 Nodamura virus])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3g80 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g80 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3g80 RCSB], [http://www.ebi.ac.uk/pdbsum/3g80 PDBsum]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Protein B2 from Nodamura virus (NMV B2), a member of the Nodavirus family, acts as a suppressor of RNA interference (RNAi). The N-terminal domain of NMV B2, consisting of residues 1-79, recognizes double-stranded RNA (dsRNA). The 2.5 A crystal structure of the RNA-binding domain of NMV B2 shows a dimeric, helical bundle structure. The structure shows a conserved set of RNA-binding residues compared with flock house virus B2, despite limited sequence identity. The crystal packing places the RNA-binding residues along one face of symmetry-related molecules, suggesting a potential platform for recognition of dsRNA.


{{STRUCTURE_3g80|  PDB=3g80  |  SCENE=  }}
Structure of the RNA-Binding Domain of Nodamura Virus Protein B2, a Suppressor of RNA Interference (dagger) , (double dagger).,Korber S, Shaik Syed Ali P, Chen JC Biochemistry. 2009 Mar 24;48(11):2307-9. PMID:19249868<ref>PMID:19249868</ref>


===Nodamura virus protein b2, RNA-binding domain===
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
</div>
{{ABSTRACT_PUBMED_19249868}}
== References ==
 
<references/>
==About this Structure==
__TOC__
[[3g80]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Nodamura_virus Nodamura virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G80 OCA].
</StructureSection>
 
==Reference==
<ref group="xtra">PMID:019249868</ref><references group="xtra"/>
[[Category: Nodamura virus]]
[[Category: Nodamura virus]]
[[Category: Ali, P Shaik Syed.]]
[[Category: Ali, P Shaik Syed]]
[[Category: Chen, J C.]]
[[Category: Chen, J C]]
[[Category: Korber, S.]]
[[Category: Korber, S]]
[[Category: Rna interference]]
[[Category: Rna interference]]
[[Category: Rna-binding]]
[[Category: Rna-binding]]
[[Category: Suppressor of rnai]]
[[Category: Suppressor of rnai]]
[[Category: Viral protein]]
[[Category: Viral protein]]
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