3fyn: Difference between revisions
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==Crystal structure from the mobile metagenome of Cole Harbour Salt Marsh: Integron Cassette Protein HFX_CASS3== | |||
<StructureSection load='3fyn' size='340' side='right' caption='[[3fyn]], [[Resolution|resolution]] 1.45Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3fyn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Uncultured_bacterium Uncultured bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FYN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FYN FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ORF1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=77133 uncultured bacterium])</td></tr> | |||
== | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fyn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fyn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3fyn RCSB], [http://www.ebi.ac.uk/pdbsum/3fyn PDBsum], [http://www.topsan.org/Proteins/MCSG/3fyn TOPSAN]</span></td></tr> | ||
[[3fyn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Uncultured_bacterium Uncultured bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FYN OCA]. | </table> | ||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fy/3fyn_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Uncultured bacterium]] | [[Category: Uncultured bacterium]] | ||
[[Category: Curmi, P M.G | [[Category: Curmi, P M.G]] | ||
[[Category: Deshpande, C N | [[Category: Deshpande, C N]] | ||
[[Category: Doolittle, W F | [[Category: Doolittle, W F]] | ||
[[Category: Edwards, A M | [[Category: Edwards, A M]] | ||
[[Category: Evdokimova, E | [[Category: Evdokimova, E]] | ||
[[Category: Harrop, S J | [[Category: Harrop, S J]] | ||
[[Category: Joachimiak, A | [[Category: Joachimiak, A]] | ||
[[Category: Koenig, J E | [[Category: Koenig, J E]] | ||
[[Category: Kudritska, M | [[Category: Kudritska, M]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Mabbutt, B C | [[Category: Mabbutt, B C]] | ||
[[Category: Osipiuk, J | [[Category: Osipiuk, J]] | ||
[[Category: Savchenko, A | [[Category: Savchenko, A]] | ||
[[Category: Stokes, H W | [[Category: Stokes, H W]] | ||
[[Category: Sureshan, V | [[Category: Sureshan, V]] | ||
[[Category: Integron cassette protein]] | [[Category: Integron cassette protein]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
[[Category: Mobile metagenome]] | [[Category: Mobile metagenome]] | ||
[[Category: Protein structure initiative | [[Category: PSI, Protein structure initiative]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Revision as of 10:24, 3 December 2014
Crystal structure from the mobile metagenome of Cole Harbour Salt Marsh: Integron Cassette Protein HFX_CASS3
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Proteopedia Page Contributors and Editors (what is this?)
Categories:
- Uncultured bacterium
- Curmi, P M.G
- Deshpande, C N
- Doolittle, W F
- Edwards, A M
- Evdokimova, E
- Harrop, S J
- Joachimiak, A
- Koenig, J E
- Kudritska, M
- Structural genomic
- Mabbutt, B C
- Osipiuk, J
- Savchenko, A
- Stokes, H W
- Sureshan, V
- Integron cassette protein
- Mcsg
- Mobile metagenome
- PSI, Protein structure initiative
- Unknown function
