3fro: Difference between revisions
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==Crystal structure of Pyrococcus abyssi glycogen synthase with open and closed conformations== | |||
<StructureSection load='3fro' size='340' side='right' caption='[[3fro]], [[Resolution|resolution]] 2.50Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3fro]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FRO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FRO FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NHF:1,5-ANHYDRO-D-FRUCTOSE'>NHF</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> | |||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2bis|2bis]], [[1rzu|1rzu]], [[2qzs|2qzs]]</td></tr> | |||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Starch_synthase Starch synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.21 2.4.1.21] </span></td></tr> | |||
== | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fro FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fro OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3fro RCSB], [http://www.ebi.ac.uk/pdbsum/3fro PDBsum]</span></td></tr> | ||
[[3fro]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FRO OCA]. | </table> | ||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fr/3fro_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Pyrococcus abyssi]] | [[Category: Pyrococcus abyssi]] | ||
[[Category: Starch synthase]] | [[Category: Starch synthase]] | ||
[[Category: Diaz, A | [[Category: Diaz, A]] | ||
[[Category: Ferrer, J C | [[Category: Ferrer, J C]] | ||
[[Category: Fita, I | [[Category: Fita, I]] | ||
[[Category: Guinovart, J J | [[Category: Guinovart, J J]] | ||
[[Category: Glycosyltransferase family]] | [[Category: Glycosyltransferase family]] | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
[[Category: Two rossman fold]] | [[Category: Two rossman fold]] | ||
[[Category: Udp/adp-glucose-glycogen synthase]] | [[Category: Udp/adp-glucose-glycogen synthase]] | ||
