Pre-mRNA-splicing factor: Difference between revisions
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
{{#tree:id=OrganizedByTopic|openlevels=0| | |||
*Pre-mRNA-splicing factor 2 | |||
[[3beg]] – hPrp residues 105-219 + Ser/Thr-protein kinase – human<BR /> | **[[3beg]] – hPrp residues 105-219 + Ser/Thr-protein kinase – human<BR /> | ||
[[2o3d]] – hPrp P33 subunit | **[[2o3d]] – hPrp P33 subunit | ||
*Pre-mRNA-splicing factor 3 | |||
[[1x4q]] – hPrp PWI domain - NMR<BR /> | **[[1x4q]] – hPrp PWI domain - NMR<BR /> | ||
*Pre-mRNA-splicing factor 3B | |||
[[3lqv]], [[2f9d]], [[2f9j]] – hPrp residues 377-415 + pre-mRNA branch site protein 14<BR /> | **[[3lqv]], [[2f9d]], [[2f9j]] – hPrp residues 377-415 + pre-mRNA branch site protein 14<BR /> | ||
[[2fho]] - hPrp residues 379-424 + spliceosomal protein P14 - NMR<BR /> | **[[2fho]] - hPrp residues 379-424 + spliceosomal protein P14 - NMR<BR /> | ||
[[2do5]] – hPrp subunit 2 – NMR<BR /> | **[[2do5]] – hPrp subunit 2 – NMR<BR /> | ||
[[1x5t]] - hPrp subunit 4 – NMR<BR /> | **[[1x5t]] - hPrp subunit 4 – NMR<BR /> | ||
[[1x5u]] - hPrp subunit 4 RNA-binding domain – NMR<BR /> | **[[1x5u]] - hPrp subunit 4 RNA-binding domain – NMR<BR /> | ||
*Pre-mRNA-splicing factor 8 | |||
[[3sbt]], [[4ilh]] – yPrp RNAseH like domain + A1 cistron-splicing factor AAR2 – yeast<BR /> | **[[3sbt]], [[4ilh]] – yPrp RNAseH like domain + A1 cistron-splicing factor AAR2 – yeast<BR /> | ||
[[4jk7]], [[4jk9]] - yPrp RNAseH like domain <br /> | **[[4jk7]], [[4jk9]] - yPrp RNAseH like domain <br /> | ||
[[4ilj]], [[4jk8]], [[4jka]], [[4jkb]], [[4jkc]], [[4jkd]], [[4jke]], [[4jkf]], [[4jkg]], [[4jkh]] - yPrp RNAseH like domain (mutant)<br /> | **[[4ilj]], [[4jk8]], [[4jka]], [[4jkb]], [[4jkc]], [[4jkd]], [[4jke]], [[4jkf]], [[4jkg]], [[4jkh]] - yPrp RNAseH like domain (mutant)<br /> | ||
[[3e66]] – yPrp β-finger domain<BR /> | **[[3e66]] – yPrp β-finger domain<BR /> | ||
[[3e9o]], [[3e9p]] - yPrp RNA-binding domain<BR /> | **[[3e9o]], [[3e9p]] - yPrp RNA-binding domain<BR /> | ||
[[2p87]], [[2og4]], [[3sbg]] - yPrp C terminal<BR /> | **[[2p87]], [[2og4]], [[3sbg]] - yPrp C terminal<BR /> | ||
[[3zef]], [[4i43]] – yPrp + A1 cistron-splicing factor AAR2<br /> | **[[3zef]], [[4i43]] – yPrp + A1 cistron-splicing factor AAR2<br /> | ||
[[4bgd]] – yPrp JAB1/MPN domain + pre-mRNA-splicing helicase BRR2<br /> | **[[4bgd]] – yPrp JAB1/MPN domain + pre-mRNA-splicing helicase BRR2<br /> | ||
[[4kit]] – yPrp JAB1/MPN domain + U5 small nuclear ribonucleoprotein helicase <br /> | **[[4kit]] – yPrp JAB1/MPN domain + U5 small nuclear ribonucleoprotein helicase <br /> | ||
[[4ilg]] – yPrp JAB1/MPN+RNAseH domains + A1 cistron-splicing factor AAR2 <br /> | **[[4ilg]] – yPrp JAB1/MPN+RNAseH domains + A1 cistron-splicing factor AAR2 <br /> | ||
[[4bgd]] – yPrp JAB1/MPN+RNAseH domains + A1 cistron-splicing factor AAR2 + pre-mRNA-splicing helicase BRR2<br /> | **[[4bgd]] – yPrp JAB1/MPN+RNAseH domains + A1 cistron-splicing factor AAR2 + pre-mRNA-splicing helicase BRR2<br /> | ||
[[3lru]] – hPrp residues 1831-1990<BR /> | **[[3lru]] – hPrp residues 1831-1990<BR /> | ||
[[3e9l]] – hPrp endonuclease domain<BR /> | **[[3e9l]] – hPrp endonuclease domain<BR /> | ||
[[3enb]] - hPrp core domain IV<BR /> | **[[3enb]] - hPrp core domain IV<BR /> | ||
[[2p8r]] – Prp C terminal (mutant) – ''Caenorhabditis elegans'' | **[[2p8r]] – Prp C terminal (mutant) – ''Caenorhabditis elegans'' | ||
*Pre-mRNA-splicing factor 9 | |||
[[4dgw]] – yPrp + Prp 21 + Prp 11 | **[[4dgw]] – yPrp + Prp 21 + Prp 11 | ||
*Pre-mRNA-splicing factor 11 | |||
[[4dgw]] – yPrp + Prp 21 + Prp 9 | **[[4dgw]] – yPrp + Prp 21 + Prp 9 | ||
*Pre-mRNA-splicing factor 18 | |||
[[2dk4]] – hPrp splicing factor motif domain - NMR<BR /> | **[[2dk4]] – hPrp splicing factor motif domain - NMR<BR /> | ||
*Pre-mRNA-splicing factor 19 | |||
[[3lrv]] – yPrp WD40 domain<BR /> | **[[3lrv]] – yPrp WD40 domain<BR /> | ||
[[2bay]] – yPrp U-box<BR /> | **[[2bay]] – yPrp U-box<BR /> | ||
[[1n87]] - yPrp U-box - NMR<BR /> | **[[1n87]] - yPrp U-box - NMR<BR /> | ||
*Pre-mRNA-splicing factor 20 | |||
[[2i2y]] – Prp RNA-binding domain + RNA – ''Streptococcus'' – NMR<BR /> | **[[2i2y]] – Prp RNA-binding domain + RNA – ''Streptococcus'' – NMR<BR /> | ||
[[2i38]] - hPrp RNA-binding domain (mutant) – NMR<BR /> | **[[2i38]] - hPrp RNA-binding domain (mutant) – NMR<BR /> | ||
*Pre-mRNA-splicing factor 21 | |||
[[4dgw]] – yPrp + Prp 9 + Prp 11 | **[[4dgw]] – yPrp + Prp 9 + Prp 11 | ||
*snRNA-associated-splicing factor 24 | |||
[[2l9w]] – yPrp C terminal – NMR<BR /> | **[[2l9w]] – yPrp C terminal – NMR<BR /> | ||
[[2kh9]] – yPrp residues 115-197 + RNA – NMR<BR /> | **[[2kh9]] – yPrp residues 115-197 + RNA – NMR<BR /> | ||
[[2go9]] – yPrp RNA-binding domains – NMR<BR /> | **[[2go9]] – yPrp RNA-binding domains – NMR<BR /> | ||
[[2ghp]] - yPrp RNA-binding domains | **[[2ghp]] - yPrp RNA-binding domains | ||
*Pre-mRNA-splicing factor 31 | |||
[[2ozb]] – hPrp + RNA + tri-snRNP <br /> | **[[2ozb]] – hPrp + RNA + tri-snRNP <br /> | ||
[[3siu]], [[3siv]] – hPrp + NHP2-like protein + snRNP <br /> | **[[3siu]], [[3siv]] – hPrp + NHP2-like protein + snRNP <br /> | ||
*Pre-mRNA-splicing factor 40 | |||
[[1o6w]] – yPrp WW domain – yeast - NMR<br /> | **[[1o6w]] – yPrp WW domain – yeast - NMR<br /> | ||
[[2b7e]] – yPrp FF1 domain - NMR<br /> | **[[2b7e]] – yPrp FF1 domain - NMR<br /> | ||
[[2kfd]] – yPrp FF4 domain - NMR<br /> | **[[2kfd]] – yPrp FF4 domain - NMR<br /> | ||
*Pre-mRNA-splicing factor 43P | |||
[[2xau]], [[3kx2]] – yPrp + ADP | **[[2xau]], [[3kx2]] – yPrp + ADP | ||
*Pre-mRNA-splicing factor cwc2 | |||
[[3tp2]], [[3u1l]], [[3u1m]] – yPrp <br /> | **[[3tp2]], [[3u1l]], [[3u1m]] – yPrp <br /> | ||
*Pre-mRNA-splicing factor RBM22 | |||
[[2ytc]] – yPrp RNA-binding domain - NMR<BR /> | **[[2ytc]] – yPrp RNA-binding domain - NMR<BR /> | ||
*Pre-mRNA-splicing factor RDS3 | |||
**[[2k0a]] – yPrp - NMR<BR /> | |||
*Pre-mRNA-splicing factor URN1 | |||
**[[2juc]] – yPrp FF domain - NMR<BR /> | |||
}} | |||
Revision as of 10:17, 4 December 2014
Pre-mRNA-splicing factors (Prp) are the proteins which associate with mRNA at its various splicing sites to produce alternative splicing. For details on pre-mRNA-splicing factors see
3D Structures of pre-mRNA splicing factors
Updated on 04-December-2014
