Sigma factor: Difference between revisions
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
{{#tree:id=OrganizedByTopic|openlevels=0| | |||
*Sigma factor | |||
[[1ku2]] – TaSF region 1.2-3.1 – ''Thermus aquaticus''<br /> | **[[1ku2]] – TaSF region 1.2-3.1 – ''Thermus aquaticus''<br /> | ||
[[1ku3]] – TaSF region 4 (mutant)<br /> | **[[1ku3]] – TaSF region 4 (mutant)<br /> | ||
[[3les]] – TaSF residues 93-271<br /> | **[[3les]] – TaSF residues 93-271<br /> | ||
[[1sig]] – EcSF – ''Escherichia coli''<br /> | **[[1sig]] – EcSF – ''Escherichia coli''<br /> | ||
[[2mao]] – EcSF region 2 - NMR<br /> | **[[2mao]] – EcSF region 2 - NMR<br /> | ||
[[1tty]] – TmSF-70 region 4 – ''Thermotoga maritima''<br /> | **[[1tty]] – TmSF-70 region 4 – ''Thermotoga maritima''<br /> | ||
[[1tty]] – TmSF-70 region 1.1 (mutant) - NMR<br /> | **[[1tty]] – TmSF-70 region 1.1 (mutant) - NMR<br /> | ||
[[2ahq]] – AaSF-54 C terminal – ''Aquifex aeolicus'' - NMR<br /> | **[[2ahq]] – AaSF-54 C terminal – ''Aquifex aeolicus'' - NMR<br /> | ||
[[2k9l]], [[2k9m]] – AaSF-54 core domain - NMR<br /> | **[[2k9l]], [[2k9m]] – AaSF-54 core domain - NMR<br /> | ||
[[3mzy]] – SF-H – ''Fusobacterium nucleatum''<br /> | **[[3mzy]] – SF-H – ''Fusobacterium nucleatum''<br /> | ||
*Sigma factor complex with DNA | |||
[[3ugo]], [[3ugp]] - TaSF region 2 + DNA<br /> | **[[3ugo]], [[3ugp]] - TaSF region 2 + DNA<br /> | ||
[[4ki2]] - TaSF region 2-3 + DNA<br /> | **[[4ki2]] - TaSF region 2-3 + DNA<br /> | ||
[[2h27]] – EcSF-E region 4 + DNA<br /> | **[[2h27]] – EcSF-E region 4 + DNA<br /> | ||
[[2map]] – EcSF region 2 + DNA - NMR<br /> | **[[2map]] – EcSF region 2 + DNA - NMR<br /> | ||
[[2o8k]], [[2o9l]] – AaSF-54 C terminal + DNA - NMR<br /> | **[[2o8k]], [[2o9l]] – AaSF-54 C terminal + DNA - NMR<br /> | ||
*Sigma factor complex with protein | |||
[[3lev]] – TaSF residues 93-271 + antibody<br /> | **[[3lev]] – TaSF residues 93-271 + antibody<br /> | ||
[[1or7]] – EcSF-E + σ-E factor negative regulatory protein <br /> | **[[1or7]] – EcSF-E + σ-E factor negative regulatory protein <br /> | ||
[[4lup]] – EcSF residues 3-92 + EcSF region 2 <br /> | **[[4lup]] – EcSF residues 3-92 + EcSF region 2 <br /> | ||
[[1tlh]] – EcSF-70 region 4 + anti-σ factor<br /> | **[[1tlh]] – EcSF-70 region 4 + anti-σ factor<br /> | ||
[[2p7v]] – EcSF-70 region 4 + regulator of σ D<br /> | **[[2p7v]] – EcSF-70 region 4 + regulator of σ D<br /> | ||
[[1rp3]], [[1sc5]] – AaSF-28 + anti-σ factor FLGM <br /> | **[[1rp3]], [[1sc5]] – AaSF-28 + anti-σ factor FLGM <br /> | ||
[[3hug]] – MtSF + membrane protein – ''Mycobacterium tuberculosis''<br /> | **[[3hug]] – MtSF + membrane protein – ''Mycobacterium tuberculosis''<br /> | ||
[[4nqw]] – MtSF-K region 4 + anti-σ factor<br /> | **[[4nqw]] – MtSF-K region 4 + anti-σ factor<br /> | ||
[[3wod]] – TtSF + RNAP subunits α,β,β’,ω - ''Thermus thermophilus'' <br /> | **[[3wod]] – TtSF + RNAP subunits α,β,β’,ω - ''Thermus thermophilus'' <br /> | ||
[[4mq9]] – TtSF-70 + RNAP subunits α,β,β’,ω + antibiotic <br /> | **[[4mq9]] – TtSF-70 + RNAP subunits α,β,β’,ω + antibiotic <br /> | ||
[[1l9u]] – TaSF region 1.1-4 + RNAP subunits α,β,β’,ω<br /> | **[[1l9u]] – TaSF region 1.1-4 + RNAP subunits α,β,β’,ω<br /> | ||
[[4mex]] – EcSF-70 + RNAP subunits α,β,β’,ω + antibiotic <br /> | **[[4mex]] – EcSF-70 + RNAP subunits α,β,β’,ω + antibiotic <br /> | ||
[[4mey]], [[4ljz]], [[4lk1]] – EcSF-70 + RNAP subunits α,β,β’,ω <br /> | **[[4mey]], [[4ljz]], [[4lk1]] – EcSF-70 + RNAP subunits α,β,β’,ω <br /> | ||
[[4lk0]], [[4llg]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + RNAP inhibitor<br /> | **[[4lk0]], [[4llg]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + RNAP inhibitor<br /> | ||
[[4cxf]] – SF CNRH + CNRY – ''Cupriavidus metallidurans''<br /> | **[[4cxf]] – SF CNRH + CNRY – ''Cupriavidus metallidurans''<br /> | ||
[[4g6d]], [[4g8x]], [[4g94]] – SF-70 region 4 + Orf067 – ''Staphylococcus aureus''<br /> | **[[4g6d]], [[4g8x]], [[4g94]] – SF-70 region 4 + Orf067 – ''Staphylococcus aureus''<br /> | ||
*Sigma factor complex with protein and DNA | |||
**[[1rio]] - TaSF region 4 + repression protein CI + DNA<br /> | |||
**[[4oin]], [[4oip]], [[4oiq]], [[4oir]] – TtSF-A + RNAP subunits α,β,β’,ω + antibiotic + DNA<br /> | |||
**[[4oio]] – TtSF-A + RNAP subunits α,β,β’,ω + DNA<br /> | |||
**[[3n97]] – TaSF region 4 + RNAP subunits α + DNA<br /> | |||
**[[1l9u]] – TaSF + RNAP subunits α,β,β’,ω + DNA – Cryo EM <br /> | |||
**[[3iyd]] – EcSF-70 + EcRNAP subunits α,β,β’,ω + catabolite gene activator + DNA<br /> | |||
}} | |||
== References == | == References == | ||