1ofl: Difference between revisions

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[[Image:1ofl.gif|left|200px]]<br /><applet load="1ofl" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:1ofl.gif|left|200px]]
caption="1ofl, resolution 1.70&Aring;" />
 
'''CRYSTAL STRUCTURE OF CHONDROITINASE B COMPLEXED TO DERMATAN SULFATE HEXASACCHARIDE'''<br />
{{Structure
|PDB= 1ofl |SIZE=350|CAPTION= <scene name='initialview01'>1ofl</scene>, resolution 1.70&Aring;
|SITE= <scene name='pdbsite=AC1:Ca+Binding+Site+For+Chain+A'>AC1</scene>
|LIGAND= <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene> and <scene name='pdbligand=MXZ:6-DEOXY-2-O-METHYL-ALPHA-L-GALACTOPYRANOSE'>MXZ</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Transferred_entry:_4.2.2.20 Transferred entry: 4.2.2.20], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.2.4 4.2.2.4]
|GENE=
}}
 
'''CRYSTAL STRUCTURE OF CHONDROITINASE B COMPLEXED TO DERMATAN SULFATE HEXASACCHARIDE'''
 


==Overview==
==Overview==
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==About this Structure==
==About this Structure==
1OFL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pedobacter_heparinus Pedobacter heparinus] with <scene name='pdbligand=GLA:'>GLA</scene>, <scene name='pdbligand=BGC:'>BGC</scene>, <scene name='pdbligand=CA:'>CA</scene> and <scene name='pdbligand=MXZ:'>MXZ</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Transferred_entry:_4.2.2.20 Transferred entry: 4.2.2.20], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.2.4 4.2.2.4] Known structural/functional Site: <scene name='pdbsite=AC1:Ca+Binding+Site+For+Chain+A'>AC1</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OFL OCA].  
1OFL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pedobacter_heparinus Pedobacter heparinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OFL OCA].  


==Reference==
==Reference==
The structure of chondroitin B lyase complexed with glycosaminoglycan oligosaccharides unravels a calcium-dependent catalytic machinery., Michel G, Pojasek K, Li Y, Sulea T, Linhardt RJ, Raman R, Prabhakar V, Sasisekharan R, Cygler M, J Biol Chem. 2004 Jul 30;279(31):32882-96. Epub 2004 May 21. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15155751 15155751]
The structure of chondroitin B lyase complexed with glycosaminoglycan oligosaccharides unravels a calcium-dependent catalytic machinery., Michel G, Pojasek K, Li Y, Sulea T, Linhardt RJ, Raman R, Prabhakar V, Sasisekharan R, Cygler M, J Biol Chem. 2004 Jul 30;279(31):32882-96. Epub 2004 May 21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15155751 15155751]
[[Category: Pedobacter heparinus]]
[[Category: Pedobacter heparinus]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: lyase]]
[[Category: lyase]]


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