3ii0: Difference between revisions
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==Crystal structure of human Glutamate oxaloacetate transaminase 1 (GOT1)== | |||
=== | <StructureSection load='3ii0' size='340' side='right' caption='[[3ii0]], [[Resolution|resolution]] 2.05Å' scene=''> | ||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3ii0]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3II0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3II0 FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=TAR:D(-)-TARTARIC+ACID'>TAR</scene></td></tr> | |||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ajs|1ajs]]</td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GOT1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr> | |||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aspartate_transaminase Aspartate transaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.1 2.6.1.1] </span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ii0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ii0 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ii0 RCSB], [http://www.ebi.ac.uk/pdbsum/3ii0 PDBsum]</span></td></tr> | |||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ii/3ii0_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
== | ==See Also== | ||
[[ | *[[Aspartate Aminotransferase|Aspartate Aminotransferase]] | ||
__TOC__ | |||
</StructureSection> | |||
[[Category: Aspartate transaminase]] | [[Category: Aspartate transaminase]] | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Arrowsmith, C H | [[Category: Arrowsmith, C H]] | ||
[[Category: Bountra, C | [[Category: Bountra, C]] | ||
[[Category: Bray, J E | [[Category: Bray, J E]] | ||
[[Category: Chaikuad, A | [[Category: Chaikuad, A]] | ||
[[Category: Cooper, C | [[Category: Cooper, C]] | ||
[[Category: Delft, F von | [[Category: Delft, F von]] | ||
[[Category: Edwards, A | [[Category: Edwards, A]] | ||
[[Category: Kavanagh, K L | [[Category: Kavanagh, K L]] | ||
[[Category: Muniz, J | [[Category: Muniz, J]] | ||
[[Category: Oppermann, U | [[Category: Oppermann, U]] | ||
[[Category: Pilka, E | [[Category: Pilka, E]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Ugochukwu, E | [[Category: Ugochukwu, E]] | ||
[[Category: Weigelt, J | [[Category: Weigelt, J]] | ||
[[Category: Yue, W W | [[Category: Yue, W W]] | ||
[[Category: Amino acid metabolism]] | [[Category: Amino acid metabolism]] | ||
[[Category: Aminotransferase]] | [[Category: Aminotransferase]] | ||
| Line 29: | Line 49: | ||
[[Category: Pyridoxal phosphate-dependent enzyme]] | [[Category: Pyridoxal phosphate-dependent enzyme]] | ||
[[Category: Sgc]] | [[Category: Sgc]] | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
[[Category: Urea and tricarboxylic acid cycle]] | [[Category: Urea and tricarboxylic acid cycle]] | ||
Revision as of 06:18, 18 December 2014
Crystal structure of human Glutamate oxaloacetate transaminase 1 (GOT1)
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Proteopedia Page Contributors and Editors (what is this?)
Categories:
- Aspartate transaminase
- Homo sapiens
- Arrowsmith, C H
- Bountra, C
- Bray, J E
- Chaikuad, A
- Cooper, C
- Delft, F von
- Edwards, A
- Kavanagh, K L
- Muniz, J
- Oppermann, U
- Pilka, E
- Structural genomic
- Ugochukwu, E
- Weigelt, J
- Yue, W W
- Amino acid metabolism
- Aminotransferase
- Aspartate aminotransferase 1
- Glutamate oxaloacetate transaminase 1
- Phosphoprotein
- Pyridoxal phosphate
- Pyridoxal phosphate-dependent enzyme
- Sgc
- Transferase
- Urea and tricarboxylic acid cycle
