3gkl: Difference between revisions

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~~{{STRUCTURE_3gkl| PDB=3gkl | SCENE= }}~~

==Following evolutionary paths to high affinity and selectivity protein-protein interactions using Colicin7 and Immunity proteins==

===Following evolutionary paths to high affinity and selectivity protein-protein interactions using Colicin7 and Immunity proteins===

~~{{ABSTRACT_PUBMED_019749752}}~~

== Structural highlights ==

<table><tr><td colspan='2'>[[3gkl]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GKL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GKL FirstGlance]. <br>

==~~About this Structure~~==

</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>

[[3gkl]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GKL OCA].

<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3gjn|3gjn]]</td></tr>

<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">colE7, cea ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]), imm, ceiE9 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gkl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gkl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gkl RCSB], [http://www.ebi.ac.uk/pdbsum/3gkl PDBsum]</span></td></tr>

</table>

== Evolutionary Conservation ==

[[Image:Consurf_key_small.gif|200px|right]]

Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/3gkl_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].

==See Also==

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*[[Mutant immunity protein 9 (variant R12-13)|Mutant immunity protein 9 (variant R12-13)]]

*[[Mutant immunity protein 9 (variant R12-2)|Mutant immunity protein 9 (variant R12-2)]]

__TOC__

~~==Reference==~~

</StructureSection>

~~<ref group="xtra">PMID:019749752</ref>~~<~~references group="xtra"~~/>

[[Category: Escherichia coli]]

[[Category: Dym, O.]]

[[Category: Dym, O]]

[[Category: ISPC, Israel Structural Proteomics Center.]]

[[Category: ISPC, Israel Structural Proteomics Center]]

[[Category: Tawfik, D S.]]

[[Category: Tawfik, D S]]

[[Category: Antibiotic]]

[[Category: Antimicrobial]]

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Line 39:

[[Category: Endonuclease]]

[[Category: Hydrolase]]

~~[[Category: ISPC]]~~

~~[[Category: Israel Structural Proteomics Center]]~~

[[Category: Metal-binding]]

[[Category: Nuclease]]

[[Category: Protein-protein complex]]

[[Category: Structural genomic]]

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@@ Line 1: / Line 1: @@
-{{STRUCTURE_3gkl|  PDB=3gkl  |  SCENE=  }}
+==Following evolutionary paths to high affinity and selectivity protein-protein interactions using Colicin7 and Immunity proteins==
-===Following evolutionary paths to high affinity and selectivity protein-protein interactions using Colicin7 and Immunity proteins===
+<StructureSection load='3gkl' size='340' side='right' caption='[[3gkl]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-{{ABSTRACT_PUBMED_019749752}}
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3gkl]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GKL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GKL FirstGlance]. <br>
-==About this Structure==
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-[[3gkl]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GKL OCA].
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3gjn|3gjn]]</td></tr>
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">colE7, cea ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]), imm, ceiE9 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gkl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gkl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gkl RCSB], [http://www.ebi.ac.uk/pdbsum/3gkl PDBsum]</span></td></tr>
+</table>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/3gkl_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
 ==See Also==
@@ Line 14: / Line 27: @@
 *[[Mutant immunity protein 9 (variant R12-13)|Mutant immunity protein 9 (variant R12-13)]]
 *[[Mutant immunity protein 9 (variant R12-2)|Mutant immunity protein 9 (variant R12-2)]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:019749752</ref><references group="xtra"/>
 [[Category: Escherichia coli]]
-[[Category: Dym, O.]]
+[[Category: Dym, O]]
-[[Category: ISPC, Israel Structural Proteomics Center.]]
+[[Category: ISPC, Israel Structural Proteomics Center]]
-[[Category: Tawfik, D S.]]
+[[Category: Tawfik, D S]]
 [[Category: Antibiotic]]
 [[Category: Antimicrobial]]
@@ Line 27: / Line 39: @@
 [[Category: Endonuclease]]
 [[Category: Hydrolase]]
-[[Category: ISPC]]
-[[Category: Israel Structural Proteomics Center]]
 [[Category: Metal-binding]]
 [[Category: Nuclease]]
 [[Category: Protein-protein complex]]
 [[Category: Structural genomic]]