1vt6: Difference between revisions

Line 1:

~~{{STRUCTURE_1vt6| PDB=1vt6 | SCENE= }}~~

==Molecular structure of the octamer D(G-G-C-C-G-G-C-C) modified A-DNA==

===Molecular structure of the octamer D(G-G-C-C-G-G-C-C) modified A-DNA===

~~{{ABSTRACT_PUBMED_6955784}}~~

== Structural highlights ==

<table><tr><td colspan='2'>[[1vt6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VT6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VT6 FirstGlance]. <br>

</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vt6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vt6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vt6 RCSB], [http://www.ebi.ac.uk/pdbsum/1vt6 PDBsum]</span></td></tr>

</table>

== Publication Abstract from PubMed ==

The deoxynucleotide fragment d(GpGpCpCpGpGpCpC) was synthesized and crystallized, and its three-dimensional structure was determined by x-ray diffraction techniques to a resolution of 2.25 A. The molecule forms a right-handed double helix in which the two base pairs at either end of the molecule are in the conventional A-DNA conformation, while the central four base pairs have a modified form in which alternate residues have sugar conformations that are closer to those in B-DNA than in A-DNA. The molecules have an intermolecular contact in which the planar terminal guanine . cytosine base pair lies on the flat minor groove surface of the A-DNA helix.

~~==About this Structure==~~

Molecular structure of the octamer d(G-G-C-C-G-G-C-C): modified A-DNA.,Wang AH, Fujii S, van Boom JH, Rich A Proc Natl Acad Sci U S A. 1982 Jul;79(13):3968-72. PMID:6955784<ref>PMID:6955784</ref>

~~[[1vt6]] is a 1 chain~~ structure~~. Full crystallographic information is available from [http~~:~~//oca~~.~~weizmann~~.ac.~~il/oca-bin~~/~~ocashort?id=1VT6 OCA].~~

==~~Reference~~==

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>

~~<ref group="xtra">PMID:006955784</ref>~~<references ~~group="xtra"~~/><~~references~~/>

</div>

[[Category: Boom, J H.Van.]]

== References ==

[[Category: Fujii, S.]]

[[Category: Rich, A.]]

__TOC__

[[Category: Wang, A H.J.]]

</StructureSection>

[[Category: Boom, J H.Van]]

[[Category: Fujii, S]]

[[Category: Rich, A]]

[[Category: Wang, A H.J]]

[[Category: A-dna]]

[[Category: Dna]]

[[Category: Double helix]]

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@@ Line 1: / Line 1: @@
-{{STRUCTURE_1vt6|  PDB=1vt6  |  SCENE=  }}
+==Molecular structure of the octamer D(G-G-C-C-G-G-C-C) modified A-DNA==
-===Molecular structure of the octamer D(G-G-C-C-G-G-C-C) modified A-DNA===
+<StructureSection load='1vt6' size='340' side='right' caption='[[1vt6]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-{{ABSTRACT_PUBMED_6955784}}
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1vt6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VT6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VT6 FirstGlance]. <br>
+</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vt6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vt6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vt6 RCSB], [http://www.ebi.ac.uk/pdbsum/1vt6 PDBsum]</span></td></tr>
+</table>
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+The deoxynucleotide fragment d(GpGpCpCpGpGpCpC) was synthesized and crystallized, and its three-dimensional structure was determined by x-ray diffraction techniques to a resolution of 2.25 A. The molecule forms a right-handed double helix in which the two base pairs at either end of the molecule are in the conventional A-DNA conformation, while the central four base pairs have a modified form in which alternate residues have sugar conformations that are closer to those in B-DNA than in A-DNA. The molecules have an intermolecular contact in which the planar terminal guanine . cytosine base pair lies on the flat minor groove surface of the A-DNA helix.
-==About this Structure==
+Molecular structure of the octamer d(G-G-C-C-G-G-C-C): modified A-DNA.,Wang AH, Fujii S, van Boom JH, Rich A Proc Natl Acad Sci U S A. 1982 Jul;79(13):3968-72. PMID:6955784<ref>PMID:6955784</ref>
-[[1vt6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VT6 OCA].
-==Reference==
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-<ref group="xtra">PMID:006955784</ref><references group="xtra"/><references/>
+</div>
-[[Category: Boom, J H.Van.]]
+== References ==
-[[Category: Fujii, S.]]
+<references/>
-[[Category: Rich, A.]]
+__TOC__
-[[Category: Wang, A H.J.]]
+</StructureSection>
+[[Category: Boom, J H.Van]]
+[[Category: Fujii, S]]
+[[Category: Rich, A]]
+[[Category: Wang, A H.J]]
 [[Category: A-dna]]
 [[Category: Dna]]
 [[Category: Double helix]]