3lyy: Difference between revisions
From Proteopedia
Jump to navigationJump to search
m Protected "3lyy" [edit=sysop:move=sysop] |
No edit summary |
||
| Line 1: | Line 1: | ||
==Crystal structure of the MucBP domain of the adhesion protein PEPE_0118 from Pediococcus pentosaceus. Northeast Structural Genomics Consortium target id PtR41A== | |||
<StructureSection load='3lyy' size='340' side='right' caption='[[3lyy]], [[Resolution|resolution]] 1.90Å' scene=''> | |||
== Structural highlights == | |||
== | <table><tr><td colspan='2'>[[3lyy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pediococcus_pentosaceus Pediococcus pentosaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LYY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LYY FirstGlance]. <br> | ||
[[3lyy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pediococcus_pentosaceus Pediococcus pentosaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LYY OCA]. | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PEPE_0118 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1255 Pediococcus pentosaceus])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lyy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lyy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3lyy RCSB], [http://www.ebi.ac.uk/pdbsum/3lyy PDBsum]</span></td></tr> | |||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/3lyy_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Pediococcus pentosaceus]] | [[Category: Pediococcus pentosaceus]] | ||
[[Category: Acton, T B | [[Category: Acton, T B]] | ||
[[Category: Baran, M C | [[Category: Baran, M C]] | ||
[[Category: Cunningham, K | [[Category: Cunningham, K]] | ||
[[Category: Hunt, J F | [[Category: Hunt, J F]] | ||
[[Category: Janjua, H | [[Category: Janjua, H]] | ||
[[Category: Lew, S | [[Category: Lew, S]] | ||
[[Category: Liu, J | [[Category: Liu, J]] | ||
[[Category: Montelione, G T | [[Category: Montelione, G T]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Owens, L | [[Category: Owens, L]] | ||
[[Category: Seetharaman, J | [[Category: Seetharaman, J]] | ||
[[Category: Tong, L | [[Category: Tong, L]] | ||
[[Category: Wang, D | [[Category: Wang, D]] | ||
[[Category: Xiao, R | [[Category: Xiao, R]] | ||
[[Category: Cell adhesion]] | [[Category: Cell adhesion]] | ||
[[Category: Cell wall]] | [[Category: Cell wall]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
[[Category: Peptidoglycan-anchor]] | [[Category: Peptidoglycan-anchor]] | ||
[[Category: Protein structure initiative | [[Category: PSI, Protein structure initiative]] | ||
Revision as of 14:42, 18 December 2014
Crystal structure of the MucBP domain of the adhesion protein PEPE_0118 from Pediococcus pentosaceus. Northeast Structural Genomics Consortium target id PtR41A
| ||||||||||||
