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{{STRUCTURE_3ku2|  PDB=3ku2  |  SCENE=  }}
==Crystal Structure of inactivated form of CDPK1 from toxoplasma gondii, TGME49.101440==
===Crystal Structure of inactivated form of CDPK1 from toxoplasma gondii, TGME49.101440===
<StructureSection load='3ku2' size='340' side='right' caption='[[3ku2]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
{{ABSTRACT_PUBMED_20436473}}
== Structural highlights ==
<table><tr><td colspan='2'>[[3ku2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Toxoplasma_gondii Toxoplasma gondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KU2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KU2 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CDPK1, TGME49_101440 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5811 Toxoplasma gondii])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ku2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ku2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ku2 RCSB], [http://www.ebi.ac.uk/pdbsum/3ku2 PDBsum]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ku/3ku2_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Calcium-dependent protein kinases (CDPKs) have pivotal roles in the calcium-signaling pathway in plants, ciliates and apicomplexan parasites and comprise a calmodulin-dependent kinase (CaMK)-like kinase domain regulated by a calcium-binding domain in the C terminus. To understand this intramolecular mechanism of activation, we solved the structures of the autoinhibited (apo) and activated (calcium-bound) conformations of CDPKs from the apicomplexan parasites Toxoplasma gondii and Cryptosporidium parvum. In the apo form, the C-terminal CDPK activation domain (CAD) resembles a calmodulin protein with an unexpected long helix in the N terminus that inhibits the kinase domain in the same manner as CaMKII. Calcium binding triggers the reorganization of the CAD into a highly intricate fold, leading to its relocation around the base of the kinase domain to a site remote from the substrate binding site. This large conformational change constitutes a distinct mechanism in calcium signal-transduction pathways.


==About this Structure==
Structures of apicomplexan calcium-dependent protein kinases reveal mechanism of activation by calcium.,Wernimont AK, Artz JD, Finerty P Jr, Lin YH, Amani M, Allali-Hassani A, Senisterra G, Vedadi M, Tempel W, Mackenzie F, Chau I, Lourido S, Sibley LD, Hui R Nat Struct Mol Biol. 2010 May;17(5):596-601. Epub 2010 May 2. PMID:20436473<ref>PMID:20436473</ref>
[[3ku2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Toxoplasma_gondii Toxoplasma gondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KU2 OCA].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
<ref group="xtra">PMID:020436473</ref><references group="xtra"/><references/>
</div>
 
==See Also==
*[[Calcium-dependent protein kinase|Calcium-dependent protein kinase]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Toxoplasma gondii]]
[[Category: Toxoplasma gondii]]
[[Category: Arrowsmith, C H.]]
[[Category: Arrowsmith, C H]]
[[Category: Artz, J D.]]
[[Category: Artz, J D]]
[[Category: Bochkarev, A.]]
[[Category: Bochkarev, A]]
[[Category: Bountra, C.]]
[[Category: Bountra, C]]
[[Category: Edwards, A M.]]
[[Category: Edwards, A M]]
[[Category: Finnerty, P.]]
[[Category: Finnerty, P]]
[[Category: Hassani, A A.]]
[[Category: Hassani, A A]]
[[Category: He, H.]]
[[Category: He, H]]
[[Category: Hui, R.]]
[[Category: Hui, R]]
[[Category: Lourido, S.]]
[[Category: Lourido, S]]
[[Category: Mackenzie, F.]]
[[Category: Mackenzie, F]]
[[Category: SGC, Structural Genomics Consortium.]]
[[Category: Structural genomic]]
[[Category: Sibley, D L.]]
[[Category: Sibley, D L]]
[[Category: Sinestera, G.]]
[[Category: Sinestera, G]]
[[Category: Vedadi, M.]]
[[Category: Vedadi, M]]
[[Category: Wasney, G.]]
[[Category: Wasney, G]]
[[Category: Weigelt, J.]]
[[Category: Weigelt, J]]
[[Category: Wernimont, A K.]]
[[Category: Wernimont, A K]]
[[Category: Xiao, T.]]
[[Category: Xiao, T]]
[[Category: Y H., Lin.]]
[[Category: Y H., Lin]]
[[Category: Atp-binding]]
[[Category: Atp-binding]]
[[Category: Cdpk]]
[[Category: Cdpk]]
Line 35: Line 59:
[[Category: Serine/threonine-protein kinase]]
[[Category: Serine/threonine-protein kinase]]
[[Category: Sgc]]
[[Category: Sgc]]
[[Category: Structural genomic]]
[[Category: Structural genomics consortium]]
[[Category: Toxoplasma]]
[[Category: Toxoplasma]]
[[Category: Transferase]]
[[Category: Transferase]]

Revision as of 17:53, 18 December 2014

Crystal Structure of inactivated form of CDPK1 from toxoplasma gondii, TGME49.101440

3ku2, resolution 2.30Å

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