3oaj: Difference between revisions

Line 1:

~~{{STRUCTURE_3oaj| PDB=3oaj | SCENE= }}~~

==CRYSTAL STRUCTURE OF putative dioxygenase from Bacillus subtilis subsp. subtilis str. 168==

===CRYSTAL STRUCTURE OF putative dioxygenase from Bacillus subtilis subsp. subtilis str. 168===

== Structural highlights ==

==~~Function~~==

<table><tr><td colspan='2'>[[3oaj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis Bacillus subtilis subsp. subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OAJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OAJ FirstGlance]. <br>

[[~~http://www.uniprot.org/uniprot/MHQO_BACSU MHQO_BACSU~~]] ~~Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds (Potential)~~.

</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>

<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BSU05490, CAB12356.1, mhqO, ydfO ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=135461 Bacillus subtilis subsp. subtilis])</td></tr>

==~~About this Structure~~==

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3oaj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oaj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3oaj RCSB], [http://www.ebi.ac.uk/pdbsum/3oaj PDBsum]</span></td></tr>

[[3oaj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis Bacillus subtilis subsp. subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OAJ OCA].

</table>

== Evolutionary Conservation ==

[[Image:Consurf_key_small.gif|200px|right]]

Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oa/3oaj_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].

__TOC__

</StructureSection>

[[Category: Bacillus subtilis subsp. subtilis]]

[[Category: Almo, S C.]]

[[Category: Almo, S C]]

[[Category: Foti, R.]]

[[Category: Foti, R]]

[[Category: Garrett, S.]]

[[Category: Garrett, S]]

[[Category: Malashkevich, V N.]]

[[Category: Malashkevich, V N]]

[[Category: ~~NYSGRC, New York~~ Structural ~~Genomics Research Consortium.~~]]

[[Category: Structural genomic]]

[[Category: Seidel, R.]]

[[Category: Seidel, R]]

[[Category: Toro, R~~.]]~~

[[Category: Toro, R]]

~~[[Category: New york structural genomics research consortium~~]]

[[Category: Nysgrc]]

[[Category: Protein structure initiative]]

[[Category: PSI, Protein structure initiative]]

[[Category: Psi-biology]]

~~[[Category: Structural genomic]]~~

[[Category: Unknown function]]

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@@ Line 1: / Line 1: @@
-{{STRUCTURE_3oaj|  PDB=3oaj  |  SCENE=  }}
+==CRYSTAL STRUCTURE OF putative dioxygenase from Bacillus subtilis subsp. subtilis str. 168==
-===CRYSTAL STRUCTURE OF putative dioxygenase from Bacillus subtilis subsp. subtilis str. 168===
+<StructureSection load='3oaj' size='340' side='right' caption='[[3oaj]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
+== Structural highlights ==
-==Function==
+<table><tr><td colspan='2'>[[3oaj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis Bacillus subtilis subsp. subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OAJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OAJ FirstGlance]. <br>
-[[http://www.uniprot.org/uniprot/MHQO_BACSU MHQO_BACSU]] Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds (Potential).
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BSU05490, CAB12356.1, mhqO, ydfO ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=135461 Bacillus subtilis subsp. subtilis])</td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3oaj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oaj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3oaj RCSB], [http://www.ebi.ac.uk/pdbsum/3oaj PDBsum]</span></td></tr>
-[[3oaj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis Bacillus subtilis subsp. subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OAJ OCA].
+</table>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oa/3oaj_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Bacillus subtilis subsp. subtilis]]
-[[Category: Almo, S C.]]
+[[Category: Almo, S C]]
-[[Category: Foti, R.]]
+[[Category: Foti, R]]
-[[Category: Garrett, S.]]
+[[Category: Garrett, S]]
-[[Category: Malashkevich, V N.]]
+[[Category: Malashkevich, V N]]
-[[Category: NYSGRC, New York Structural Genomics Research Consortium.]]
+[[Category: Structural genomic]]
-[[Category: Seidel, R.]]
+[[Category: Seidel, R]]
-[[Category: Toro, R.]]
+[[Category: Toro, R]]
-[[Category: New york structural genomics research consortium]]
 [[Category: Nysgrc]]
-[[Category: Protein structure initiative]]
+[[Category: PSI, Protein structure initiative]]
 [[Category: Psi-biology]]
-[[Category: Structural genomic]]
 [[Category: Unknown function]]