1he8: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
==RAS G12V - PI 3-KINASE GAMMA COMPLEX== | |||
=== | <StructureSection load='1he8' size='340' side='right' caption='[[1he8]], [[Resolution|resolution]] 3.00Å' scene=''> | ||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1he8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. The April 2012 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Ras Protein'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2012_4 10.2210/rcsb_pdb/mom_2012_4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HE8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1HE8 FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1e8y|1e8y]], [[1e8z|1e8z]]</td></tr> | |||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphatidylinositol_3-kinase Phosphatidylinositol 3-kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.137 2.7.1.137] </span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1he8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1he8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1he8 RCSB], [http://www.ebi.ac.uk/pdbsum/1he8 PDBsum]</span></td></tr> | |||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/he/1he8_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Ras activation of phosphoinositide 3-kinase (PI3K) is important for survival of transformed cells. We find that PI3Kgamma is strongly and directly activated by H-Ras G12V in vivo or by GTPgammaS-loaded H-Ras in vitro. We have determined a crystal structure of a PI3Kgamma/Ras.GMPPNP complex. A critical loop in the Ras binding domain positions Ras so that it uses its switch I and switch II regions to bind PI3Kgamma. Mutagenesis shows that interactions with both regions are essential for binding PI3Kgamma. Ras also forms a direct contact with the PI3Kgamma catalytic domain. These unique Ras/PI3Kgamma interactions are likely to be shared by PI3Kalpha. The complex with Ras shows a change in the PI3K conformation that may represent an allosteric component of Ras activation. | |||
Crystal structure and functional analysis of Ras binding to its effector phosphoinositide 3-kinase gamma.,Pacold ME, Suire S, Perisic O, Lara-Gonzalez S, Davis CT, Walker EH, Hawkins PT, Stephens L, Eccleston JF, Williams RL Cell. 2000 Dec 8;103(6):931-43. PMID:11136978<ref>PMID:11136978</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
==See Also== | ==See Also== | ||
*[[Phosphoinositide 3-Kinases|Phosphoinositide 3-Kinases]] | *[[Phosphoinositide 3-Kinases|Phosphoinositide 3-Kinases]] | ||
== References == | |||
<references/> | |||
== | __TOC__ | ||
</StructureSection> | |||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Phosphatidylinositol 3-kinase]] | [[Category: Phosphatidylinositol 3-kinase]] | ||
[[Category: RCSB PDB Molecule of the Month]] | [[Category: RCSB PDB Molecule of the Month]] | ||
[[Category: Ras Protein]] | [[Category: Ras Protein]] | ||
[[Category: Davis, C T | [[Category: Davis, C T]] | ||
[[Category: Eccleston, J F | [[Category: Eccleston, J F]] | ||
[[Category: Hawkins, P T | [[Category: Hawkins, P T]] | ||
[[Category: Lara-Gonzalez, S | [[Category: Lara-Gonzalez, S]] | ||
[[Category: Pacold, M E | [[Category: Pacold, M E]] | ||
[[Category: Perisic, O | [[Category: Perisic, O]] | ||
[[Category: Stephens, L | [[Category: Stephens, L]] | ||
[[Category: Suire, S | [[Category: Suire, S]] | ||
[[Category: Walker, E H | [[Category: Walker, E H]] | ||
[[Category: Williams, R L | [[Category: Williams, R L]] | ||
[[Category: Gmppnp]] | [[Category: Gmppnp]] | ||
[[Category: Gtp]] | [[Category: Gtp]] | ||
| Line 36: | Line 54: | ||
[[Category: Kinase/hydrolase]] | [[Category: Kinase/hydrolase]] | ||
[[Category: Oncogene protein]] | [[Category: Oncogene protein]] | ||
[[Category: Phosphoinositide 3-kinase gamma - h-ras g12v complex]] | [[Category: Phosphoinositide 3-kinase gamma - h-ras g12v complex]] | ||
[[Category: Pi 3-k]] | [[Category: Pi 3-k]] | ||
Revision as of 21:05, 22 December 2014
RAS G12V - PI 3-KINASE GAMMA COMPLEX
| ||||||||||||
Proteopedia Page Contributors and Editors (what is this?)
Categories:
- Homo sapiens
- Phosphatidylinositol 3-kinase
- RCSB PDB Molecule of the Month
- Ras Protein
- Davis, C T
- Eccleston, J F
- Hawkins, P T
- Lara-Gonzalez, S
- Pacold, M E
- Perisic, O
- Stephens, L
- Suire, S
- Walker, E H
- Williams, R L
- Gmppnp
- Gtp
- H-ras g12v
- Heat domain
- Kinase-hydrolase complex
- Kinase/hydrolase
- Oncogene protein
- Phosphoinositide 3-kinase gamma - h-ras g12v complex
- Pi 3-k
- Pi 3-kinase
- Pi3k
- Ras effector
- Ras-binding domain
- Second messenger generation
