1yfr: Difference between revisions

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[[Image:1yfr.gif|left|200px]]<br /><applet load="1yfr" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:1yfr.gif|left|200px]]
caption="1yfr, resolution 2.15&Aring;" />
 
'''crystal structure of alanyl-tRNA synthetase in complex with ATP and magnesium'''<br />
{{Structure
|PDB= 1yfr |SIZE=350|CAPTION= <scene name='initialview01'>1yfr</scene>, resolution 2.15&Aring;
|SITE=
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> and <scene name='pdbligand=ATP:ADENOSINE-5'-TRIPHOSPHATE'>ATP</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Alanine--tRNA_ligase Alanine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.7 6.1.1.7]
|GENE= alaS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 Aquifex aeolicus])
}}
 
'''crystal structure of alanyl-tRNA synthetase in complex with ATP and magnesium'''
 


==Overview==
==Overview==
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==About this Structure==
==About this Structure==
1YFR is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus] with <scene name='pdbligand=MG:'>MG</scene> and <scene name='pdbligand=ATP:'>ATP</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Alanine--tRNA_ligase Alanine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.7 6.1.1.7] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YFR OCA].  
1YFR is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YFR OCA].  


==Reference==
==Reference==
Breaking sieve for steric exclusion of a noncognate amino acid from active site of a tRNA synthetase., Swairjo MA, Schimmel PR, Proc Natl Acad Sci U S A. 2005 Jan 25;102(4):988-93. Epub 2005 Jan 18. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15657145 15657145]
Breaking sieve for steric exclusion of a noncognate amino acid from active site of a tRNA synthetase., Swairjo MA, Schimmel PR, Proc Natl Acad Sci U S A. 2005 Jan 25;102(4):988-93. Epub 2005 Jan 18. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15657145 15657145]
[[Category: Alanine--tRNA ligase]]
[[Category: Alanine--tRNA ligase]]
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
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[[Category: magnesium bridge]]
[[Category: magnesium bridge]]


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