2j4u: Difference between revisions
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==E.coli OmpC - camel Lactoferrin complex== | |||
=== | <StructureSection load='2j4u' size='340' side='right' caption='[[2j4u]], [[Resolution|resolution]] 2.99Å' scene=''> | ||
== Structural highlights == | |||
==Function== | <table><tr><td colspan='2'>[[2j4u]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Camelus_dromedarius Camelus dromedarius] and [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J4U FirstGlance]. <br> | ||
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2j1n|2j1n]], [[1dtz|1dtz]], [[1i6q|1i6q]]</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j4u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2j4u RCSB], [http://www.ebi.ac.uk/pdbsum/2j4u PDBsum]</span></td></tr> | |||
</table> | |||
== Function == | |||
[[http://www.uniprot.org/uniprot/OMPC_ECOLI OMPC_ECOLI]] Forms pores that allow passive diffusion of small molecules across the outer membrane. [[http://www.uniprot.org/uniprot/TRFL_CAMDR TRFL_CAMDR]] Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate (By similarity). The lactotransferrin transferrin-like domain 1 functions as a serine protease of the peptidase S60 family that cuts arginine rich regions. This function contributes to the antimicrobial activity (By similarity). | [[http://www.uniprot.org/uniprot/OMPC_ECOLI OMPC_ECOLI]] Forms pores that allow passive diffusion of small molecules across the outer membrane. [[http://www.uniprot.org/uniprot/TRFL_CAMDR TRFL_CAMDR]] Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate (By similarity). The lactotransferrin transferrin-like domain 1 functions as a serine protease of the peptidase S60 family that cuts arginine rich regions. This function contributes to the antimicrobial activity (By similarity). | ||
== Evolutionary Conservation == | |||
== | [[Image:Consurf_key_small.gif|200px|right]] | ||
[[ | Check<jmol> | ||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j4/2j4u_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | ==See Also== | ||
*[[Lactoferrin|Lactoferrin]] | *[[Lactoferrin|Lactoferrin]] | ||
*[[Porin|Porin]] | *[[Porin|Porin]] | ||
__TOC__ | |||
</StructureSection> | |||
[[Category: Camelus dromedarius]] | [[Category: Camelus dromedarius]] | ||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
[[Category: Acharya, R K | [[Category: Acharya, R K]] | ||
[[Category: Baalaji, S | [[Category: Baalaji, S]] | ||
[[Category: Krishnaswamy, S | [[Category: Krishnaswamy, S]] | ||
[[Category: Singh, T P | [[Category: Singh, T P]] | ||
[[Category: Antiacterial peptide]] | [[Category: Antiacterial peptide]] | ||
[[Category: Complex]] | [[Category: Complex]] | ||
