1rb8: Difference between revisions
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1rb8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_alpha3 Enterobacteria phage alpha3] and [http://en.wikipedia.org/wiki/Enterobacteria_phage_phix174 Enterobacteria phage phix174]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RB8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RB8 FirstGlance]. <br> | <table><tr><td colspan='2'>[[1rb8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_alpha3 Enterobacteria phage alpha3] and [http://en.wikipedia.org/wiki/Enterobacteria_phage_phix174 Enterobacteria phage phix174]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RB8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RB8 FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1m06|1m06]], [[1m0f|1m0f]], [[2bpa|2bpa]]</td></tr> | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1m06|1m06]], [[1m0f|1m0f]], [[2bpa|2bpa]]</td></tr> | ||
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">J ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10847 Enterobacteria phage phiX174])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">J ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10847 Enterobacteria phage phiX174])</td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rb8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1rb8 RCSB], [http://www.ebi.ac.uk/pdbsum/1rb8 PDBsum]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rb8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1rb8 RCSB], [http://www.ebi.ac.uk/pdbsum/1rb8 PDBsum]</span></td></tr> | ||
<table> | </table> | ||
== Function == | |||
[[http://www.uniprot.org/uniprot/VGF_BPAL3 VGF_BPAL3]] F protein is the major capsid component. [[http://www.uniprot.org/uniprot/J_BPPHX J_BPPHX]] Mediates ssDNA packaging into virion, it locates to the internal surface of the capsid, thereby displacing the internal scaffolding protein B during virion formation. Additionally, protein J plays a role in viral attachment to the host cell. [[http://www.uniprot.org/uniprot/G_BPAL3 G_BPAL3]] Attaches the circulating virion to the bacterial lipopolysaccharides which serve as receptor for the virus. Determines the phage host-range. Probably triggers with protein H the injection of the phage DNA into the host cytoplasm upon conformational changes induced by the interaction with host lipopolysaccharides (By similarity). | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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[[Category: Enterobacteria phage alpha3]] | [[Category: Enterobacteria phage alpha3]] | ||
[[Category: Enterobacteria phage phix174]] | [[Category: Enterobacteria phage phix174]] | ||
[[Category: Bernal, R A | [[Category: Bernal, R A]] | ||
[[Category: Esmeralda, R | [[Category: Esmeralda, R]] | ||
[[Category: Fane, B A | [[Category: Fane, B A]] | ||
[[Category: Hafenstein, S | [[Category: Hafenstein, S]] | ||
[[Category: Rossmann, M G | [[Category: Rossmann, M G]] | ||
[[Category: Alpha3]] | [[Category: Alpha3]] | ||
[[Category: Bacteriophage alpha3]] | [[Category: Bacteriophage alpha3]] | ||
