3cxm: Difference between revisions
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==Leishmania naiffi uracil-DNA glycosylase in complex with 5-bromouracil== | |||
<StructureSection load='3cxm' size='340' side='right' caption='[[3cxm]], [[Resolution|resolution]] 1.50Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3cxm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_naiffi Leishmania naiffi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CXM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CXM FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=URA:URACIL'>URA</scene>, <scene name='pdbligand=URB:5-BROMOPYRIMIDINE-2,4(1H,3H)-DIONE'>URB</scene></td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">similar to LbrM18_V2.0540 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5678 Leishmania naiffi])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cxm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cxm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cxm RCSB], [http://www.ebi.ac.uk/pdbsum/3cxm PDBsum]</span></td></tr> | |||
== | </table> | ||
[[3cxm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_naiffi Leishmania naiffi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CXM OCA]. | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cx/3cxm_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | ==See Also== | ||
*[[DNA | *[[DNA glycosylase|DNA glycosylase]] | ||
*[[Uracil-DNA glycosylase|Uracil-DNA glycosylase]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Leishmania naiffi]] | [[Category: Leishmania naiffi]] | ||
[[Category: Larson, E T | [[Category: Larson, E T]] | ||
[[Category: Merritt, E A | [[Category: Merritt, E A]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: 5-bromouracil]] | [[Category: 5-bromouracil]] | ||
[[Category: Base excision repair]] | [[Category: Base excision repair]] | ||
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[[Category: Msgpp]] | [[Category: Msgpp]] | ||
[[Category: Sgpp]] | [[Category: Sgpp]] | ||
Revision as of 14:27, 5 January 2015
Leishmania naiffi uracil-DNA glycosylase in complex with 5-bromouracil
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