4odq: Difference between revisions

Line 1:

'''~~Unreleased structure~~'''

==Structure of SlyD delta-IF from Thermus thermophilus in complex with S3 peptide==

~~The entry~~ 4odq is ~~ON HOLD until Paper Publication~~

== Structural highlights ==

<table><tr><td colspan='2'>[[4odq]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ODQ OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ODQ FirstGlance].

~~Authors~~: ~~Quistgaard~~, E.M., ~~Low~~, C., ~~Nordlund~~, P.

</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>

<tr id='NonStdRes'><td class="sblockLbl">[[Non-Standard_Residue|NonStd Res:]]</td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>

~~Description~~: ~~Structure~~ of ~~SlyD delta-IF from Thermus thermophilus~~ in ~~complex with S3 peptide~~

[[Category: ~~Unreleased Structures~~]]

<tr id='activity'><td class="sblockLbl">Activity:</td><td class="sblockDat">[http://en.wikipedia.org/wiki/Peptidylprolyl_isomerase Peptidylprolyl isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.2.1.8 5.2.1.8] </td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4odq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4odq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4odq RCSB], [http://www.ebi.ac.uk/pdbsum/4odq PDBsum]</td></tr>

</table>

== Function ==

[[http://www.uniprot.org/uniprot/RS3_ECOLI RS3_ECOLI]] Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (By similarity).<ref>PMID:15652481</ref> Plays a role in mRNA unwinding by the ribosome, possibly by forming part of a processivity clamp.<ref>PMID:15652481</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Peptidylprolyl isomerase]]

[[Category: Low, C]]

[[Category: Nordlund, P]]

[[Category: Quistgaard, E.M]]

[[Category: Quistgaard, E M]]

[[Category: ~~Low, C~~]]

[[Category: Chaperone]]

[[Category: Fkbp domain]]

[[Category: Isomerase]]

[[Category: Peptidyl-prolyl isomerase]]

[[Category: Ppiase]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
+==Structure of SlyD delta-IF from Thermus thermophilus in complex with S3 peptide==
+<StructureSection load='4odq' size='340' side='right' caption='[[4odq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-The entry 4odq is ON HOLD  until Paper Publication
+== Structural highlights ==
+<table><tr><td colspan='2'>[[4odq]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ODQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ODQ FirstGlance]. <br>
-Authors: Quistgaard, E.M., Low, C., Nordlund, P.
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
+<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
-Description: Structure of SlyD delta-IF from Thermus thermophilus in complex with S3 peptide
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4odk|4odk]], [[4odl|4odl]], [[4odm|4odm]], [[4odn|4odn]], [[4odo|4odo]], [[4odp|4odp]], [[4odr|4odr]]</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidylprolyl_isomerase Peptidylprolyl isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.2.1.8 5.2.1.8] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4odq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4odq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4odq RCSB], [http://www.ebi.ac.uk/pdbsum/4odq PDBsum]</span></td></tr>
+</table>
+== Function ==
+[[http://www.uniprot.org/uniprot/RS3_ECOLI RS3_ECOLI]] Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (By similarity).<ref>PMID:15652481</ref>   Plays a role in mRNA unwinding by the ribosome, possibly by forming part of a processivity clamp.<ref>PMID:15652481</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Peptidylprolyl isomerase]]
+[[Category: Low, C]]
 [[Category: Nordlund, P]]
-[[Category: Quistgaard, E.M]]
+[[Category: Quistgaard, E M]]
-[[Category: Low, C]]
+[[Category: Chaperone]]
+[[Category: Fkbp domain]]
+[[Category: Isomerase]]
+[[Category: Peptidyl-prolyl isomerase]]
+[[Category: Ppiase]]