3omb: Difference between revisions
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==Crystal structure of extracellular solute-binding protein from Bifidobacterium longum subsp. infantis== | |||
<StructureSection load='3omb' size='340' side='right' caption='[[3omb]], [[Resolution|resolution]] 2.10Å' scene=''> | |||
== Structural highlights == | |||
== | <table><tr><td colspan='2'>[[3omb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bifidobacterium_longum_subsp._infantis_atcc_15697_=_jcm_1222 Bifidobacterium longum subsp. infantis atcc 15697 = jcm 1222]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OMB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OMB FirstGlance]. <br> | ||
[[3omb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bifidobacterium_longum_subsp._infantis_atcc_15697_=_jcm_1222 Bifidobacterium longum subsp. infantis atcc 15697 = jcm 1222]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OMB OCA]. | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Blon_2351 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=391904 Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3omb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3omb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3omb RCSB], [http://www.ebi.ac.uk/pdbsum/3omb PDBsum]</span></td></tr> | |||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/om/3omb_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Bifidobacterium longum subsp. infantis atcc 15697 = jcm 1222]] | [[Category: Bifidobacterium longum subsp. infantis atcc 15697 = jcm 1222]] | ||
[[Category: Chang, C | [[Category: Chang, C]] | ||
[[Category: Chin, S | [[Category: Chin, S]] | ||
[[Category: Cui, H | [[Category: Cui, H]] | ||
[[Category: Dong, A | [[Category: Dong, A]] | ||
[[Category: Edwards, A | [[Category: Edwards, A]] | ||
[[Category: Joachimiak, A | [[Category: Joachimiak, A]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Savchenko, A | [[Category: Savchenko, A]] | ||
[[Category: Xu, X | [[Category: Xu, X]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
[[Category: | [[Category: PSI, Protein structure initiative]] | ||
[[Category: Transport protein]] | [[Category: Transport protein]] | ||
[[Category: Transporter]] | [[Category: Transporter]] | ||
