3k28: Difference between revisions
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==Crystal Structure of a glutamate-1-semialdehyde aminotransferase from Bacillus anthracis with bound Pyridoxal 5'Phosphate== | |||
<StructureSection load='3k28' size='340' side='right' caption='[[3k28]], [[Resolution|resolution]] 1.95Å' scene=''> | |||
== Structural highlights == | |||
== | <table><tr><td colspan='2'>[[3k28]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis_str._'ames_ancestor' Bacillus anthracis str. 'ames ancestor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K28 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K28 FirstGlance]. <br> | ||
[[3k28]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis_str._'ames_ancestor' Bacillus anthracis str. 'ames ancestor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K28 OCA]. | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BAS4358, BA_4693, GBAA_4693, hemL-2, hemL2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=261594 Bacillus anthracis str. 'Ames Ancestor'])</td></tr> | |||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutamate-1-semialdehyde_2,1-aminomutase Glutamate-1-semialdehyde 2,1-aminomutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.3.8 5.4.3.8] </span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k28 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k28 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3k28 RCSB], [http://www.ebi.ac.uk/pdbsum/3k28 PDBsum]</span></td></tr> | |||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k2/3k28_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Bacillus anthracis str. 'ames ancestor']] | [[Category: Bacillus anthracis str. 'ames ancestor']] | ||
[[Category: Glutamate-1-semialdehyde 2,1-aminomutase]] | [[Category: Glutamate-1-semialdehyde 2,1-aminomutase]] | ||
[[Category: Anderson, W F | [[Category: Anderson, W F]] | ||
[[Category: Brunzelle, J S | [[Category: Brunzelle, J S]] | ||
[[Category: Savchenko, A | [[Category: Savchenko, A]] | ||
[[Category: Sharma, S S | [[Category: Sharma, S S]] | ||
[[Category: Skarina, T | [[Category: Skarina, T]] | ||
[[Category: Wawrzak, Z | [[Category: Wawrzak, Z]] | ||
[[Category: And carrier]] | [[Category: And carrier]] | ||
[[Category: Biosynthesis of cofactor]] | [[Category: Biosynthesis of cofactor]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Csgid]] | [[Category: Csgid]] | ||
[[Category: Department of health and human service]] | [[Category: Department of health and human service]] | ||
| Line 23: | Line 40: | ||
[[Category: Prosthetic group]] | [[Category: Prosthetic group]] | ||
[[Category: Pyridoxal phosphate]] | [[Category: Pyridoxal phosphate]] | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
Revision as of 09:14, 15 February 2015
Crystal Structure of a glutamate-1-semialdehyde aminotransferase from Bacillus anthracis with bound Pyridoxal 5'Phosphate
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Proteopedia Page Contributors and Editors (what is this?)
Categories:
- Bacillus anthracis str. 'ames ancestor'
- Glutamate-1-semialdehyde 2,1-aminomutase
- Anderson, W F
- Brunzelle, J S
- Savchenko, A
- Sharma, S S
- Skarina, T
- Wawrzak, Z
- And carrier
- Biosynthesis of cofactor
- Structural genomic
- Csgid
- Department of health and human service
- Isomerase
- National institute of allergy and infectious disease
- National institutes of health
- Porphyrin biosynthesis
- Prosthetic group
- Pyridoxal phosphate
- Transferase
