2q1f: Difference between revisions

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[[Image:2q1f.jpg|left|200px]]<br /><applet load="2q1f" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:2q1f.jpg|left|200px]]
caption="2q1f, resolution 2.85&Aring;" />
 
'''Crystal structure of chondroitin sulfate lyase abc from bacteroides thetaiotaomicron wal2926'''<br />
{{Structure
|PDB= 2q1f |SIZE=350|CAPTION= <scene name='initialview01'>2q1f</scene>, resolution 2.85&Aring;
|SITE= <scene name='pdbsite=AC1:Ca+Binding+Site+For+Residue+A+2001'>AC1</scene>, <scene name='pdbsite=AC2:Ca+Binding+Site+For+Residue+B+2002'>AC2</scene>, <scene name='pdbsite=AC3:Po4+Binding+Site+For+Residue+B+2003'>AC3</scene>, <scene name='pdbsite=AC4:Po4+Binding+Site+For+Residue+A+2002'>AC4</scene>, <scene name='pdbsite=AC5:Po4+Binding+Site+For+Residue+A+2003'>AC5</scene>, <scene name='pdbsite=AC6:Po4+Binding+Site+For+Residue+B+2004'>AC6</scene>, <scene name='pdbsite=AC7:Po4+Binding+Site+For+Residue+A+2004'>AC7</scene>, <scene name='pdbsite=AC8:Po4+Binding+Site+For+Residue+B+2005'>AC8</scene>, <scene name='pdbsite=AC9:Po4+Binding+Site+For+Residue+A+2005'>AC9</scene>, <scene name='pdbsite=BC1:Po4+Binding+Site+For+Residue+B+2006'>BC1</scene>, <scene name='pdbsite=BC2:Po4+Binding+Site+For+Residue+A+2006'>BC2</scene>, <scene name='pdbsite=BC3:Po4+Binding+Site+For+Residue+A+2007'>BC3</scene>, <scene name='pdbsite=BC4:Po4+Binding+Site+For+Residue+B+2007'>BC4</scene>, <scene name='pdbsite=BC5:Po4+Binding+Site+For+Residue+B+2008'>BC5</scene>, <scene name='pdbsite=BC6:Po4+Binding+Site+For+Residue+A+2008'>BC6</scene>, <scene name='pdbsite=BC7:Po4+Binding+Site+For+Residue+A+2009'>BC7</scene>, <scene name='pdbsite=BC8:Po4+Binding+Site+For+Residue+B+2009'>BC8</scene> and <scene name='pdbsite=BC9:Po4+Binding+Site+For+Residue+B+2010'>BC9</scene>
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene> and <scene name='pdbligand=PO4:PHOSPHATE ION'>PO4</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Chondroitin-sulfate-ABC_endolyase Chondroitin-sulfate-ABC endolyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.2.20 4.2.2.20]
|GENE= cslABC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=818 Bacteroides thetaiotaomicron])
}}
 
'''Crystal structure of chondroitin sulfate lyase abc from bacteroides thetaiotaomicron wal2926'''
 


==Overview==
==Overview==
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==About this Structure==
==About this Structure==
2Q1F is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron] with <scene name='pdbligand=CA:'>CA</scene> and <scene name='pdbligand=PO4:'>PO4</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Chondroitin-sulfate-ABC_endolyase Chondroitin-sulfate-ABC endolyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.2.20 4.2.2.20] Known structural/functional Sites: <scene name='pdbsite=AC1:Ca+Binding+Site+For+Residue+A+2001'>AC1</scene>, <scene name='pdbsite=AC2:Ca+Binding+Site+For+Residue+B+2002'>AC2</scene>, <scene name='pdbsite=AC3:Po4+Binding+Site+For+Residue+B+2003'>AC3</scene>, <scene name='pdbsite=AC4:Po4+Binding+Site+For+Residue+A+2002'>AC4</scene>, <scene name='pdbsite=AC5:Po4+Binding+Site+For+Residue+A+2003'>AC5</scene>, <scene name='pdbsite=AC6:Po4+Binding+Site+For+Residue+B+2004'>AC6</scene>, <scene name='pdbsite=AC7:Po4+Binding+Site+For+Residue+A+2004'>AC7</scene>, <scene name='pdbsite=AC8:Po4+Binding+Site+For+Residue+B+2005'>AC8</scene>, <scene name='pdbsite=AC9:Po4+Binding+Site+For+Residue+A+2005'>AC9</scene>, <scene name='pdbsite=BC1:Po4+Binding+Site+For+Residue+B+2006'>BC1</scene>, <scene name='pdbsite=BC2:Po4+Binding+Site+For+Residue+A+2006'>BC2</scene>, <scene name='pdbsite=BC3:Po4+Binding+Site+For+Residue+A+2007'>BC3</scene>, <scene name='pdbsite=BC4:Po4+Binding+Site+For+Residue+B+2007'>BC4</scene>, <scene name='pdbsite=BC5:Po4+Binding+Site+For+Residue+B+2008'>BC5</scene>, <scene name='pdbsite=BC6:Po4+Binding+Site+For+Residue+A+2008'>BC6</scene>, <scene name='pdbsite=BC7:Po4+Binding+Site+For+Residue+A+2009'>BC7</scene>, <scene name='pdbsite=BC8:Po4+Binding+Site+For+Residue+B+2009'>BC8</scene> and <scene name='pdbsite=BC9:Po4+Binding+Site+For+Residue+B+2010'>BC9</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1F OCA].  
2Q1F is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1F OCA].  


==Reference==
==Reference==
Composite Active Site of Chondroitin Lyase ABC Accepting Both Epimers of Uronic Acid., Shaya D, Hahn BS, Bjerkan TM, Kim WS, Park NY, Sim JS, Kim YS, Cygler M, Glycobiology. 2008 Feb 18;. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18227125 18227125]
Composite Active Site of Chondroitin Lyase ABC Accepting Both Epimers of Uronic Acid., Shaya D, Hahn BS, Bjerkan TM, Kim WS, Park NY, Sim JS, Kim YS, Cygler M, Glycobiology. 2008 Feb 18;. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18227125 18227125]
[[Category: Bacteroides thetaiotaomicron]]
[[Category: Bacteroides thetaiotaomicron]]
[[Category: Chondroitin-sulfate-ABC endolyase]]
[[Category: Chondroitin-sulfate-ABC endolyase]]
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[[Category: lyase]]
[[Category: lyase]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:35:00 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:20:29 2008''
Retrieved from "https://proteopedia.org/2q1f"