Practical Guide to Homology Modeling: Difference between revisions
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Under the subheading ''3D Structure Databases'', click on the linked UniProt ID at ProteinModelPortal. Here you will find bar graphics showing the coverage by pre-calculated homology models. Touching the blue bars reports the sequence range for each model. | Under the subheading ''3D Structure Databases'', click on the linked UniProt ID at ProteinModelPortal. Here you will find bar graphics showing the coverage by pre-calculated homology models. Touching the blue bars reports the sequence range for each model. | ||
Below is a table listing sequence ranges and percentages of sequence identity. Clicking on '''<nowiki>[Show]</nowiki>''' | Below is a table listing sequence ranges and percentages of sequence identity. Clicking on '''<nowiki>[Show]</nowiki>''' gives you a report with a link to download the homology model. | ||
* SWISSMODEL: use the '''<nowiki>[ download ]</nowiki>''' link. | |||
* <font color='red'>Important for MODBASE:</font> | |||
Notice the section at the bottom of the page ''Remodel this protein''. This is a good option if you don't find a satisfactory model. | Notice the section at the bottom of the page ''Remodel this protein''. This is a good option if you don't find a satisfactory model. | ||
