2vka: Difference between revisions

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[[Image:2vka.jpg|left|200px]]<br /><applet load="2vka" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:2vka.jpg|left|200px]]
caption="2vka, resolution 2.000&Aring;" />
 
'''SITE-DIRECTED MUTAGENESIS OF THE CATALYTIC TRYPTOPHAN ENVIRONMENT IN PLEUROTUS ERYNGII VERSATILE PEROXIDASE'''<br />
{{Structure
|PDB= 2vka |SIZE=350|CAPTION= <scene name='initialview01'>2vka</scene>, resolution 2.000&Aring;
|SITE= <scene name='pdbsite=AC1:Hem+Binding+Site+For+Chain+A'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Chain+A'>AC2</scene>, <scene name='pdbsite=AC3:Ca+Binding+Site+For+Chain+A'>AC3</scene>, <scene name='pdbsite=AC4:Ca+Binding+Site+For+Chain+A'>AC4</scene> and <scene name='pdbsite=AC5:Gol+Binding+Site+For+Chain+A'>AC5</scene>
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
|ACTIVITY=
|GENE=
}}
 
'''SITE-DIRECTED MUTAGENESIS OF THE CATALYTIC TRYPTOPHAN ENVIRONMENT IN PLEUROTUS ERYNGII VERSATILE PEROXIDASE'''
 


==Overview==
==Overview==
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==About this Structure==
==About this Structure==
2VKA is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pleurotus_eryngii Pleurotus eryngii] with <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=CA:'>CA</scene>, <scene name='pdbligand=HEM:'>HEM</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Hem+Binding+Site+For+Chain+A'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Chain+A'>AC2</scene>, <scene name='pdbsite=AC3:Ca+Binding+Site+For+Chain+A'>AC3</scene>, <scene name='pdbsite=AC4:Ca+Binding+Site+For+Chain+A'>AC4</scene> and <scene name='pdbsite=AC5:Gol+Binding+Site+For+Chain+A'>AC5</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VKA OCA].  
2VKA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pleurotus_eryngii Pleurotus eryngii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VKA OCA].  


==Reference==
==Reference==
Site-Directed Mutagenesis of the Catalytic Tryptophan Environment in Pleurotus eryngii Versatile Peroxidase(,)., Ruiz-Duenas FJ, Morales M, Mate MJ, Romero A, Martinez MJ, Smith AT, Martinez AT, Biochemistry. 2008 Feb 12;47(6):1685-95. Epub 2008 Jan 18. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18201105 18201105]
Site-Directed Mutagenesis of the Catalytic Tryptophan Environment in Pleurotus eryngii Versatile Peroxidase(,)., Ruiz-Duenas FJ, Morales M, Mate MJ, Romero A, Martinez MJ, Smith AT, Martinez AT, Biochemistry. 2008 Feb 12;47(6):1685-95. Epub 2008 Jan 18. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18201105 18201105]
[[Category: Pleurotus eryngii]]
[[Category: Pleurotus eryngii]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: allelic variant]]
[[Category: allelic variant]]
[[Category: aromatic-substrate binding]]
[[Category: aromatic-substrate binding]]
[[Category: class ii ( fungal) peroxidases]]
[[Category: class ii ( fungal) peroxidase]]
[[Category: electron transfer]]
[[Category: electron transfer]]
[[Category: homology modeling]]
[[Category: homology modeling]]
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[[Category: lignin peroxidase]]
[[Category: lignin peroxidase]]
[[Category: manganese peroxidase]]
[[Category: manganese peroxidase]]
[[Category: mn-independent oxidation phenolic non-phenolic aromatics]]
[[Category: mn-independent oxidation phenolic non-phenolic aromatic]]
[[Category: mnii oxidation]]
[[Category: mnii oxidation]]
[[Category: oxidoreductase]]
[[Category: oxidoreductase]]
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[[Category: polyvalent peroxidase]]
[[Category: polyvalent peroxidase]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:56:31 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:47:23 2008''
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