Connexin: Difference between revisions

From Proteopedia
Jump to navigationJump to search
No edit summary
No edit summary
Line 23: Line 23:
==Structure of the cx26 protomer:==
==Structure of the cx26 protomer:==
As mentioned before the connexin [http://en.wikipedia.org/wiki/Promoter_(genetics) protomer] has <scene name='70/701426/Connexin_structure/1'>four transmembrane (TM1–4), two extracellular loops , a cytoplasmic loop, an N-terminal helix (NTH), and a C-terminal segment </scene>. Cx26 forms a typical four-helix bundle in which any pair of adjacent helices is antiparallel. The major pore-lining helix TM1 is inclined, so that the pore diameter narrows from the cytoplasmic to the extracellular side of the membrane, and ends in a short [http://en.wikipedia.org/wiki/310_helix 3<sub>10</sub> helix].
As mentioned before the connexin [http://en.wikipedia.org/wiki/Promoter_(genetics) protomer] has <scene name='70/701426/Connexin_structure/1'>four transmembrane (TM1–4), two extracellular loops , a cytoplasmic loop, an N-terminal helix (NTH), and a C-terminal segment </scene>. Cx26 forms a typical four-helix bundle in which any pair of adjacent helices is antiparallel. The major pore-lining helix TM1 is inclined, so that the pore diameter narrows from the cytoplasmic to the extracellular side of the membrane, and ends in a short [http://en.wikipedia.org/wiki/310_helix 3<sub>10</sub> helix].
The extracellular loop E1 contains a [http://en.wikipedia.org/wiki/310_helix 3<sub>10</sub> helix] at the beginning and a short α-helix in its C-terminal. E2, together with E1, contains a short antiparallel β-sheet and stretches over E1, forming the outside <scene name='70/701426/Connexon_bachbone/1'>wall</scene> of the connexon</scene>. Six conserved cysteine residues, three in each loop, form intramolecular disulphide bonds between E1 and E2  Most of the prominent intra-protomer interactions are in the extracellular part of the transmembrane region, The interactions between the two adjoining connexons of the gap junction channel, which involve both E1 and E2 .[[image:E1.jpg | thumb | center | 250px]]
The extracellular loop E1 contains a [http://en.wikipedia.org/wiki/310_helix 3<sub>10</sub> helix] at the beginning and a short α-helix in its C-terminal. E2, together with E1, contains a short antiparallel β-sheet and stretches over E1, forming the outside <scene name='70/701426/Connexon_bachbone/1'>wall</scene> of the connexon. Six conserved cysteine residues, three in each loop, form intramolecular disulphide bonds between E1 and E2  Most of the prominent intra-protomer interactions are in the extracellular part of the transmembrane region, The interactions between the two adjoining connexons of the gap junction channel, which involve both E1 and E2 .[[image:E1.jpg | thumb | center | 250px]]
The N-terminal half of E2 seems rather flexible and its amino-acid sequence varies greatly among connexins . The C-terminal half of E2 begins with a 310 turn is followed by a conserved Pro-Cys-Pro motif that reverses its direction back to TM4. Most of the prominent intra-protomer interactions are in the extracellular part of the transmembrane region . Arg 32 (TM1) interactswithGln 80 (TM2),Glu 147 (TM3), and Ser 199 (TM4). Two hydrophobic cores around Trp 44 (E1) and Trp 77 (TM2) stabilize the protomer structure. Ala 39 (TM1), Ala 40 (TM1), Val 43 (E1) and Ile 74 (TM2) contribute to the first hydrophobic core around Trp 44, and Phe 154 (TM3) and Met 195 (TM4) form the second core with Trp 77 . In the intracellular part of the transmembrane region, Arg 143 (TM3) forms hydrogen bonds with Asn 206 (TM3)  and Ser 139 (TM3) .<ref name='Structure'/>
The N-terminal half of E2 seems rather flexible and its amino-acid sequence varies greatly among connexins . The C-terminal half of E2 begins with a 310 turn is followed by a conserved Pro-Cys-Pro motif that reverses its direction back to TM4. Most of the prominent intra-protomer interactions are in the extracellular part of the transmembrane region . Arg 32 (TM1) interactswithGln 80 (TM2),Glu 147 (TM3), and Ser 199 (TM4). Two hydrophobic cores around Trp 44 (E1) and Trp 77 (TM2) stabilize the protomer structure. Ala 39 (TM1), Ala 40 (TM1), Val 43 (E1) and Ile 74 (TM2) contribute to the first hydrophobic core around Trp 44, and Phe 154 (TM3) and Met 195 (TM4) form the second core with Trp 77 . In the intracellular part of the transmembrane region, Arg 143 (TM3) forms hydrogen bonds with Asn 206 (TM3)  and Ser 139 (TM3) .<ref name='Structure'/>
[[image:bonds.jpg | thumb | center | 300px]]
[[image:bonds.jpg | thumb | center | 300px]]

Revision as of 16:32, 19 May 2015

Caption for this structure

Drag the structure with the mouse to rotate

References

Proteopedia Page Contributors and Editors (what is this?)

Safaa Salah Hussiesy, Doaa Naffaa, Michal Harel, Jaime Prilusky