2z8y: Difference between revisions

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New page: left|200px<br /><applet load="2z8y" size="350" color="white" frame="true" align="right" spinBox="true" caption="2z8y, resolution 2.51Å" /> '''Xenon-bound structur...
 
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[[Image:2z8y.jpg|left|200px]]<br /><applet load="2z8y" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:2z8y.jpg|left|200px]]
caption="2z8y, resolution 2.51&Aring;" />
 
'''Xenon-bound structure of bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase(CODH/ACS) from Moorella thermoacetica'''<br />
{{Structure
|PDB= 2z8y |SIZE=350|CAPTION= <scene name='initialview01'>2z8y</scene>, resolution 2.51&Aring;
|SITE= <scene name='pdbsite=AC1:Cu1+Binding+Site+For+Residue+M+950'>AC1</scene>, <scene name='pdbsite=AC2:Ni+Binding+Site+For+Residue+M+951'>AC2</scene>, <scene name='pdbsite=AC3:Cu1+Binding+Site+For+Residue+N+950'>AC3</scene>, <scene name='pdbsite=AC4:Ni+Binding+Site+For+Residue+N+951'>AC4</scene>, <scene name='pdbsite=AC5:Cu1+Binding+Site+For+Residue+O+950'>AC5</scene>, <scene name='pdbsite=AC6:Ni+Binding+Site+For+Residue+O+951'>AC6</scene>, <scene name='pdbsite=AC7:Cu1+Binding+Site+For+Residue+P+950'>AC7</scene>, <scene name='pdbsite=AC8:Ni+Binding+Site+For+Residue+P+951'>AC8</scene>, <scene name='pdbsite=AC9:Sf4+Binding+Site+For+Residue+A+700'>AC9</scene>, <scene name='pdbsite=BC1:Sf4+Binding+Site+For+Residue+A+750'>BC1</scene>, <scene name='pdbsite=BC2:Xcc+Binding+Site+For+Residue+A+800'>BC2</scene>, <scene name='pdbsite=BC3:Sf4+Binding+Site+For+Residue+B+700'>BC3</scene>, <scene name='pdbsite=BC4:Xcc+Binding+Site+For+Residue+B+800'>BC4</scene>, <scene name='pdbsite=BC5:Sf4+Binding+Site+For+Residue+C+700'>BC5</scene>, <scene name='pdbsite=BC6:Sf4+Binding+Site+For+Residue+C+750'>BC6</scene>, <scene name='pdbsite=BC7:Xcc+Binding+Site+For+Residue+C+800'>BC7</scene>, <scene name='pdbsite=BC8:Sf4+Binding+Site+For+Residue+D+700'>BC8</scene>, <scene name='pdbsite=BC9:Xcc+Binding+Site+For+Residue+D+800'>BC9</scene>, <scene name='pdbsite=CC1:Sf4+Binding+Site+For+Residue+M+900'>CC1</scene>, <scene name='pdbsite=CC2:Sf4+Binding+Site+For+Residue+N+900'>CC2</scene>, <scene name='pdbsite=CC3:Sf4+Binding+Site+For+Residue+O+900'>CC3</scene>, <scene name='pdbsite=CC4:Sf4+Binding+Site+For+Residue+P+900'>CC4</scene>, <scene name='pdbsite=CC5:Xe+Binding+Site+For+Residue+B+1001'>CC5</scene>, <scene name='pdbsite=CC6:Xe+Binding+Site+For+Residue+B+1003'>CC6</scene>, <scene name='pdbsite=CC7:Xe+Binding+Site+For+Residue+N+1008'>CC7</scene>, <scene name='pdbsite=CC8:Xe+Binding+Site+For+Residue+B+1010'>CC8</scene>, <scene name='pdbsite=CC9:Xe+Binding+Site+For+Residue+A+1001'>CC9</scene>, <scene name='pdbsite=DC1:Xe+Binding+Site+For+Residue+A+1003'>DC1</scene>, <scene name='pdbsite=DC2:Xe+Binding+Site+For+Residue+M+1008'>DC2</scene>, <scene name='pdbsite=DC3:Xe+Binding+Site+For+Residue+A+1010'>DC3</scene>, <scene name='pdbsite=DC4:Xe+Binding+Site+For+Residue+D+1001'>DC4</scene>, <scene name='pdbsite=DC5:Xe+Binding+Site+For+Residue+D+1003'>DC5</scene>, <scene name='pdbsite=DC6:Xe+Binding+Site+For+Residue+P+1009'>DC6</scene>, <scene name='pdbsite=DC7:Xe+Binding+Site+For+Residue+D+1010'>DC7</scene>, <scene name='pdbsite=DC8:Xe+Binding+Site+For+Residue+C+1001'>DC8</scene>, <scene name='pdbsite=DC9:Xe+Binding+Site+For+Residue+C+1003'>DC9</scene>, <scene name='pdbsite=EC1:Xe+Binding+Site+For+Residue+O+1006'>EC1</scene>, <scene name='pdbsite=EC2:Xe+Binding+Site+For+Residue+O+1009'>EC2</scene>, <scene name='pdbsite=EC3:Xe+Binding+Site+For+Residue+C+1010'>EC3</scene>, <scene name='pdbsite=EC4:Gol+Binding+Site+For+Residue+A+860'>EC4</scene>, <scene name='pdbsite=EC5:Gol+Binding+Site+For+Residue+A+861'>EC5</scene>, <scene name='pdbsite=EC6:Gol+Binding+Site+For+Residue+A+862'>EC6</scene>, <scene name='pdbsite=EC7:Gol+Binding+Site+For+Residue+A+863'>EC7</scene>, <scene name='pdbsite=EC8:Gol+Binding+Site+For+Residue+B+860'>EC8</scene>, <scene name='pdbsite=EC9:Gol+Binding+Site+For+Residue+B+861'>EC9</scene>, <scene name='pdbsite=FC1:Gol+Binding+Site+For+Residue+B+863'>FC1</scene>, <scene name='pdbsite=FC2:Gol+Binding+Site+For+Residue+C+860'>FC2</scene>, <scene name='pdbsite=FC3:Gol+Binding+Site+For+Residue+C+861'>FC3</scene>, <scene name='pdbsite=FC4:Gol+Binding+Site+For+Residue+D+860'>FC4</scene> and <scene name='pdbsite=FC5:Gol+Binding+Site+For+Residue+D+863'>FC5</scene>
|LIGAND= <scene name='pdbligand=CU1:COPPER+(I)+ION'>CU1</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=XCC:FE(4)-NI(1)-S(4)+CLUSTER'>XCC</scene>, <scene name='pdbligand=XE:XENON'>XE</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/CO-methylating_acetyl-CoA_synthase CO-methylating acetyl-CoA synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.169 2.3.1.169]
|GENE=
}}
 
'''Xenon-bound structure of bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase(CODH/ACS) from Moorella thermoacetica'''
 


==Overview==
==Overview==
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==About this Structure==
==About this Structure==
2Z8Y is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Moorella_thermoacetica Moorella thermoacetica] with <scene name='pdbligand=CU1:'>CU1</scene>, <scene name='pdbligand=NI:'>NI</scene>, <scene name='pdbligand=SF4:'>SF4</scene>, <scene name='pdbligand=XCC:'>XCC</scene>, <scene name='pdbligand=XE:'>XE</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/CO-methylating_acetyl-CoA_synthase CO-methylating acetyl-CoA synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.169 2.3.1.169] Known structural/functional Sites: <scene name='pdbsite=AC1:Cu1+Binding+Site+For+Residue+M+950'>AC1</scene>, <scene name='pdbsite=AC2:Ni+Binding+Site+For+Residue+M+951'>AC2</scene>, <scene name='pdbsite=AC3:Cu1+Binding+Site+For+Residue+N+950'>AC3</scene>, <scene name='pdbsite=AC4:Ni+Binding+Site+For+Residue+N+951'>AC4</scene>, <scene name='pdbsite=AC5:Cu1+Binding+Site+For+Residue+O+950'>AC5</scene>, <scene name='pdbsite=AC6:Ni+Binding+Site+For+Residue+O+951'>AC6</scene>, <scene name='pdbsite=AC7:Cu1+Binding+Site+For+Residue+P+950'>AC7</scene>, <scene name='pdbsite=AC8:Ni+Binding+Site+For+Residue+P+951'>AC8</scene>, <scene name='pdbsite=AC9:Sf4+Binding+Site+For+Residue+A+700'>AC9</scene>, <scene name='pdbsite=BC1:Sf4+Binding+Site+For+Residue+A+750'>BC1</scene>, <scene name='pdbsite=BC2:Xcc+Binding+Site+For+Residue+A+800'>BC2</scene>, <scene name='pdbsite=BC3:Sf4+Binding+Site+For+Residue+B+700'>BC3</scene>, <scene name='pdbsite=BC4:Xcc+Binding+Site+For+Residue+B+800'>BC4</scene>, <scene name='pdbsite=BC5:Sf4+Binding+Site+For+Residue+C+700'>BC5</scene>, <scene name='pdbsite=BC6:Sf4+Binding+Site+For+Residue+C+750'>BC6</scene>, <scene name='pdbsite=BC7:Xcc+Binding+Site+For+Residue+C+800'>BC7</scene>, <scene name='pdbsite=BC8:Sf4+Binding+Site+For+Residue+D+700'>BC8</scene>, <scene name='pdbsite=BC9:Xcc+Binding+Site+For+Residue+D+800'>BC9</scene>, <scene name='pdbsite=CC1:Sf4+Binding+Site+For+Residue+M+900'>CC1</scene>, <scene name='pdbsite=CC2:Sf4+Binding+Site+For+Residue+N+900'>CC2</scene>, <scene name='pdbsite=CC3:Sf4+Binding+Site+For+Residue+O+900'>CC3</scene>, <scene name='pdbsite=CC4:Sf4+Binding+Site+For+Residue+P+900'>CC4</scene>, <scene name='pdbsite=CC5:Xe+Binding+Site+For+Residue+B+1001'>CC5</scene>, <scene name='pdbsite=CC6:Xe+Binding+Site+For+Residue+B+1003'>CC6</scene>, <scene name='pdbsite=CC7:Xe+Binding+Site+For+Residue+N+1008'>CC7</scene>, <scene name='pdbsite=CC8:Xe+Binding+Site+For+Residue+B+1010'>CC8</scene>, <scene name='pdbsite=CC9:Xe+Binding+Site+For+Residue+A+1001'>CC9</scene>, <scene name='pdbsite=DC1:Xe+Binding+Site+For+Residue+A+1003'>DC1</scene>, <scene name='pdbsite=DC2:Xe+Binding+Site+For+Residue+M+1008'>DC2</scene>, <scene name='pdbsite=DC3:Xe+Binding+Site+For+Residue+A+1010'>DC3</scene>, <scene name='pdbsite=DC4:Xe+Binding+Site+For+Residue+D+1001'>DC4</scene>, <scene name='pdbsite=DC5:Xe+Binding+Site+For+Residue+D+1003'>DC5</scene>, <scene name='pdbsite=DC6:Xe+Binding+Site+For+Residue+P+1009'>DC6</scene>, <scene name='pdbsite=DC7:Xe+Binding+Site+For+Residue+D+1010'>DC7</scene>, <scene name='pdbsite=DC8:Xe+Binding+Site+For+Residue+C+1001'>DC8</scene>, <scene name='pdbsite=DC9:Xe+Binding+Site+For+Residue+C+1003'>DC9</scene>, <scene name='pdbsite=EC1:Xe+Binding+Site+For+Residue+O+1006'>EC1</scene>, <scene name='pdbsite=EC2:Xe+Binding+Site+For+Residue+O+1009'>EC2</scene>, <scene name='pdbsite=EC3:Xe+Binding+Site+For+Residue+C+1010'>EC3</scene>, <scene name='pdbsite=EC4:Gol+Binding+Site+For+Residue+A+860'>EC4</scene>, <scene name='pdbsite=EC5:Gol+Binding+Site+For+Residue+A+861'>EC5</scene>, <scene name='pdbsite=EC6:Gol+Binding+Site+For+Residue+A+862'>EC6</scene>, <scene name='pdbsite=EC7:Gol+Binding+Site+For+Residue+A+863'>EC7</scene>, <scene name='pdbsite=EC8:Gol+Binding+Site+For+Residue+B+860'>EC8</scene>, <scene name='pdbsite=EC9:Gol+Binding+Site+For+Residue+B+861'>EC9</scene>, <scene name='pdbsite=FC1:Gol+Binding+Site+For+Residue+B+863'>FC1</scene>, <scene name='pdbsite=FC2:Gol+Binding+Site+For+Residue+C+860'>FC2</scene>, <scene name='pdbsite=FC3:Gol+Binding+Site+For+Residue+C+861'>FC3</scene>, <scene name='pdbsite=FC4:Gol+Binding+Site+For+Residue+D+860'>FC4</scene> and <scene name='pdbsite=FC5:Gol+Binding+Site+For+Residue+D+863'>FC5</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z8Y OCA].  
2Z8Y is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Moorella_thermoacetica Moorella thermoacetica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z8Y OCA].  


==Reference==
==Reference==
Xenon in and at the End of the Tunnel of Bifunctional Carbon Monoxide Dehydrogenase/Acetyl-CoA Synthase(,)., Doukov TI, Blasiak LC, Seravalli J, Ragsdale SW, Drennan CL, Biochemistry. 2008 Mar 18;47(11):3474-83. Epub 2008 Feb 23. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18293927 18293927]
Xenon in and at the End of the Tunnel of Bifunctional Carbon Monoxide Dehydrogenase/Acetyl-CoA Synthase(,)., Doukov TI, Blasiak LC, Seravalli J, Ragsdale SW, Drennan CL, Biochemistry. 2008 Mar 18;47(11):3474-83. Epub 2008 Feb 23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18293927 18293927]
[[Category: CO-methylating acetyl-CoA synthase]]
[[Category: CO-methylating acetyl-CoA synthase]]
[[Category: Moorella thermoacetica]]
[[Category: Moorella thermoacetica]]
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[[Category: xenon]]
[[Category: xenon]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Mar 14 09:37:51 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:53:00 2008''